Sinorhizobium meliloti Rm41: BN406_06688
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Entry
BN406_06688 CDS
T02332
Symbol
gabD
Name
(GenBank) putative succinate-semialdehyde dehydrogenase [NADP(+)]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00250
Alanine, aspartate and glutamate metabolism
smi00310
Lysine degradation
smi00350
Tyrosine metabolism
smi00650
Butanoate metabolism
smi00760
Nicotinate and nicotinamide metabolism
smi01100
Metabolic pathways
smi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BN406_06688 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN406_06688 (gabD)
00310 Lysine degradation
BN406_06688 (gabD)
00350 Tyrosine metabolism
BN406_06688 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BN406_06688 (gabD)
Enzymes [BR:
smi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BN406_06688 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BN406_06688 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BN406_06688 (gabD)
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Motif
Pfam:
Aldedh
Cecropin
DUF2062
Motif
Other DBs
NCBI-ProteinID:
CCM69625
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Position
pRM41A:complement(83145..84620)
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AA seq
491 aa
AA seq
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MLEIFEPLKKHLGNPALFFPSAPDPSGSASHPRRFEVFNPSTGELLARLPDMQAEDAAAA
IDRAYAAHAEWAALTARDRSDALWGWHQLIVEHLDDLSAILTAEMGKPLAEAKSEVAHAA
AYLQWYAEEANRIYGETISAPSGDRRLIVVKQPIGVVAAITPWNFPASMIARKIAPALAA
GCTVVLKPAEQTPLVAAAMLALAHRARLPEGVVNLVLASEGAAIGREMCFNPKVRKVSFT
GSTEVGRLLMRQCSEQIKKISLELGGNAPFIVFDDADVDAAVEGAIQAKFRNAGQTCVSA
NRIYVQAWLHDAFCAKLASRVQRLVVGDGFDPRAAIGPLIDTSALAKIERHIADAVKKGG
VIHCGGRRTHEHGTFFQPTVLTGITDGMQIAREETFGPIAPVIRFDDPEQVIRDANDTIY
GLAAYFYASDLKRVWRVAEALEYGMVGVNTGRMSSEAAPFGGMKQSGIGREGSRHGLDEY
LEMKYVCLGGI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaaatcttcgaaccgctgaaaaagcacctcggcaaccccgccttgttctttccg
agcgcgcctgatccgtccggcagtgcctcgcatcctcgccgcttcgaggttttcaaccca
tcaacaggcgagttgctggcgcgcctcccggacatgcaggccgaggatgccgccgccgct
atcgaccgcgcctatgccgcacacgcggagtgggcagctctgacagcgcgcgaccgctcg
gatgcgctctgggggtggcatcagctgatagtggagcatctggacgatctttcggccatc
ctaacggccgagatgggaaagccgcttgcggaggcgaagtccgaggtcgcccacgcagcc
gcgtaccttcagtggtatgcggaggaggcaaaccgcatctacggcgagacgatttccgct
ccgtccggggaccgccgcctcatcgtggtcaagcagccgatcggagtggtcgcggcgatc
accccatggaatttcccggcgtcgatgatcgcgcgcaagatcgctcccgctctagcggct
ggctgtaccgtcgtgctgaagccggcggaacagacgccgcttgtcgccgccgccatgttg
gccctggcgcatcgggcccgccttccggaaggagtggtcaacctcgttctcgcgtcggaa
ggcgccgcaatcggcagggaaatgtgcttcaatccgaaagtgcgcaaggtcagctttacg
ggctcgacggaagtcggccgcctgctgatgcgccagtgctccgagcaaatcaagaagatc
agcctggagcttggcggcaacgcgccgtttatcgtttttgacgacgcggatgtcgatgca
gctgtcgagggtgcaatacaggcgaaatttcgcaatgccggtcagacgtgtgtttccgcc
aaccgcatctatgtgcaggcgtggctacacgatgcattttgtgccaagctggcaagccgc
gtgcaacgtctcgtcgttggcgatggtttcgacccgcgggccgccatcggaccgctgatc
gacacgagtgccttggccaaaatcgaacgacacatcgcggatgcggtgaaaaaaggcggc
gtgatccactgcggcggccggcgcacccacgagcacggcacattcttccagccgaccgtt
ctcacgggaataacggacggaatgcagatcgctcgcgaagagaccttcggccccattgcg
cccgtgatccggttcgacgacccggaacaggtcatccgtgatgccaacgacacgatctac
gggctggctgcctatttctatgcgtcggacctcaagcgcgtgtggcgggtcgccgaagcc
ctcgaatacggcatggtcggggtcaacaccggccgcatgtcatccgaggctgcgcccttt
ggcggcatgaagcaatcgggaatcggccgggagggctcgcgccatggtttggacgagtat
ctggaaatgaaatatgtctgcctgggcgggatataa
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