Sinorhizobium meliloti Rm41: BN406_06823
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Entry
BN406_06823 CDS
T02332
Symbol
traA
Name
(GenBank) putative conjugal transfer protein traA
Organism
smi
Sinorhizobium meliloti Rm41
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
Bep_C_terminal
AAA_19
Viral_helicase1
AAA_22
UvrD_C_2
AAA_11
TraI_hel_assoc_N
PhoH
SH3_13
PIF1
ssDNA_TraI_N
DUF4350
AAA_16
TrbC
Motif
Other DBs
NCBI-ProteinID:
CCM69760
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All DBs
Position
pRM41A:225073..228624
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AA seq
1183 aa
AA seq
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MSFEASFPEWSAARTTVNPTIAKGDALVNDPGRSEGAASKGAIIRRCCDALLLRPGGAAA
PDERVGFVRNREKNFVVAVPHFSVSVVARGSGRSAVLSAAYRHCAKMQYEREARTIDYTR
KQGLLHEEFVIPADAPEWLRSMVADRSVSSASEAFWNKVEDFEKRSDAQLAKDVTIALPI
ELTADQNIALVRDFVERHITSKGIVADWVYHDAPGNPHVHLMTTLRPLTDDGFGAKKVAL
LGPDGKPIRNDAGKIVYELWAGSLDDFNAFRDGWFACQNRHLALAGLDIRIDGRSFEKQG
IEVEPTIHIGVGATAIDRKAEQAKTQSSAGSPKLERIELQEARRSENARRIQRRPEIVLD
LITREKSVFDERDVAKILHRYIDDAALFQSLMIRVLQSPEALRLERERISFATGTRLSAK
YTTRKLIRLEAEMAKRAIWLAGRFSHGVREAVLEATFARHSRLSEEQKTAIEHVAGSERI
AAVIGRAGAGKTTMMKAAREGWEAAGYRVVGGALAGKAAEGLEKEAGIASRTLSSWELRW
NEGRNQLDAKTVFVLDEAGMVSSRQMAHLVETVTKAGAKLVLVGDPEQLQPIEAGAAFRA
IADRIGYAELETIYRQREQWMRDASLDLARGKVRKAVATYTAHGRMIGLRLKDEAVDTLI
ADWSRDYDPAKTTLILAHLRRDVRMLNDMARAELVERGILGEGFAFRTEDGHRNFAVGDQ
IVFLKNEGSLGVKNGMLGKVVEAAHNRIVAEIGEGEHRRQVAIEQRSYNNVDHGYATTIH
KSQGATVDRVKVLASLSLDRHLTYVAMTRHRDDLRVYYGSRSFAFAGGLTKILSRKNAKE
TTLDYEKAPFYRQALRFAETRGLHIVNVARTIARDRLEWTVRQKQKLADLAHRLLAIGTK
LGFGASTKPTHSQSSKETRPMVAGIATFPKTVEQAVADKIEADPGLKKQWEDVSSRFNLV
YAQPEAAFKTVNVDAMLKDETVARSTLAKVAGQPESFGPLKGKSGLLASRVDKQDRERAE
RNIPALAQSLGDYLRQRSQAEQRYQAEEVVARRKLSINIPALSPNARQTLERVRDAIDRN
DLPSALEFALADKMVKAELEGFAKAVADRFGERTFLTLAAKDTNGETFKTITAGIGPGQK
AEVQSAWSLMRAVQKLSAHERTVEAVKQAETLRQTKSQGLSLK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
ttgtctttcgaagccagttttcccgaatggagtgcggcacgcactactgtgaatcctaca
atcgccaagggcgatgctttggtgaatgatcccggccgttccgaaggagcggcttctaag
ggcgcaattatacgtcgctgttgcgacgctctgcttttgcgccccggcggggccgccgct
cccgacgaacgcgttggtttcgttcgcaatcgggaaaagaacttcgtcgtggctgtccct
catttctccgtcagcgtcgtcgcccgcggctccggccgcagcgccgtgctgtcggcggcc
tatcgccactgcgccaagatgcaatacgagcgggaagcgcggacgatcgactacacccgc
aagcagggccttctgcatgaggagttcgtcatcccagccgatgcacctgaatggttgcgg
tcgatggttgccgatcgctcggtctccagcgcgtcggaagccttctggaacaaggtcgag
gattttgagaagcgctccgatgcccagctcgccaaggacgtcaccattgcgctgccgatc
gaattgaccgccgaccagaacatcgcgctcgtccgagatttcgtcgaacggcacatcacc
tccaaagggatcgtggcggattgggtctatcacgatgcccccggcaatccgcatgtgcat
ctgatgacgacactgaggccgctcaccgacgacgggttcggcgccaagaaggtcgcgctt
cttggaccggacggcaagccgatccgcaacgacgccggcaaaatcgtctacgagctttgg
gccggaagcctcgacgacttcaatgcctttcgcgacggctggtttgcctgccagaaccgg
catctcgcgcttgctggtctcgatatccgtatcgacggccgatccttcgaaaaacagggc
atcgaagtggagccgaccatccatattggtgtcggcgcaacggccatcgaccggaaggcg
gagcaggcgaagacccagtcgtcggcagggtcaccaaagctcgaacggatcgagctgcag
gaggcgcggcgaagcgagaacgcacgtcgcatacagcgccggccggaaatcgtcctcgac
ctgatcacgcgtgagaagagcgtcttcgatgagcgagatgttgcgaagatcctgcatcgc
tatatcgatgatgccgccctgttccaaagcttgatgatccgtgtcctgcagagcccggaa
gcgctccgtctcgaacgcgagcggatctcgtttgcgaccgggactcggctgtcggccaaa
tacacgacgcgcaagctgatccggctcgaagcggagatggccaaacgcgcgatctggctg
gcggggcgattttcgcatggtgttcgggaagcagtgttggaggcgacgtttgcgcgccac
tcgcgcttgtcggaggagcagaagaccgcgatcgagcatgtcgcgggatccgagcggatc
gcagccgttatcggccgcgccggcgccggcaagaccacgatgatgaaagccgcgcgcgag
ggctgggaagcagccggataccgtgtcgtcggtggcgcgctggccggcaaggccgcggag
ggtttggagaaggaagcagggatcgcctcgcgcacgctttcgtcatgggagcttcgctgg
aacgaaggccgaaaccagctcgacgcaaagacggtcttcgttctcgacgaagccggcatg
gtgtcgtcgcggcagatggcgcacctggtcgagacagtgacgaaggccggcgccaagctt
gtcctggttggcgatccggaacagcttcagccgatcgaagcgggggctgcgttccgtgcg
attgccgatcgcatcggttatgccgagctcgaaaccatctatcgtcagcgcgagcaatgg
atgcgcgacgcttcgctcgatctcgctcgcggcaaggtccgcaaggccgttgctacctac
actgctcatggtcggatgatcggtttgcgtctgaaggacgaggctgtcgataccctcatc
gcagattggagccgcgactacgatccggcaaagacgacattgatcctcgcccatctccgg
cgcgacgtccggatgctcaacgacatggcgcgggccgagctcgttgagcgtggaatcctc
ggcgaaggatttgcgttccggacggaggacggacaccgcaatttcgcggtcggcgaccag
atcgtattcctgaagaacgaaggctcgctcggcgtcaagaacggcatgctcggcaaggtc
gtcgaagctgctcataaccgcattgtggcggagataggcgaaggcgagcaccgccggcag
gtcgccatcgagcagcggtcctataacaacgttgaccatggctatgccacgacgattcat
aagagtcagggcgccactgtggacagggtcaaggtgctcgcgtctctctcccttgaccgg
cacctgacctatgtggcgatgacgcgtcatcgcgatgatctccgcgtctattacggctct
cgatccttcgctttcgccggcggcctgacaaagatcctgtcgcgaaagaatgctaaggaa
accacgctcgattacgagaaggcccccttttatcgccaagcgctgcgttttgccgaaaca
cgtgggctgcatatcgtcaacgtcgcccgaacgattgcccgcgaccgactcgaatggacg
gtccgccagaagcagaaactggctgatcttgcccaccggctcctagccatcggcacgaaa
ctcggcttcggggccagcaccaaaccaacccattcgcaaagcagcaaggagaccagaccg
atggttgccggtatcgcgacatttccgaaaacggtcgagcaggcagttgccgacaagatc
gaagcggaccccggcttgaagaagcaatgggaagacgtctcgagccgcttcaatctcgtc
tatgcgcagccggaagccgccttcaagaccgtcaatgtcgacgccatgctgaaggacgag
accgtcgccagatccacgcttgcgaaggtcgccggccagccggaaagttttggcccactc
aaggggaaatccggcctgctcgcaagccgcgtcgacaagcaggatcgcgagagggcggaa
cgcaacattcccgctcttgctcaaagcctcggcgattacctgcgccagcgaagccaggcc
gaacaacgctatcaggcggaggaagtggtggcccgccgcaagctgtcgatcaacattccg
gcgctctctccgaatgcgcgccagacccttgaacgcgtgcgtgacgccatcgaccgcaat
gaccttccctcagcgctcgaattcgcacttgctgacaagatggtgaaggcggaactggag
ggatttgccaaggcggtcgccgatcgtttcggcgagcggaccttcctaaccttggccgcc
aaggacaccaatggtgaaaccttcaagacgattaccgcgggtataggccccggtcagaag
gcggaggtccagtcagcctggagcctgatgcgcgcagtgcagaagctcagtgcccatgag
cgaacggtcgaggccgtcaaacaagctgagacgctgcggcagacgaagagccaggggcta
tcgctgaaatga
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