Spiroplasma mirum ATCC 29335 SMCA: P344_01805
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Entry
P344_01805 CDS
T03382
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smia
Spiroplasma mirum ATCC 29335 SMCA
Pathway
smia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P344_01805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smia03021
]
P344_01805
03400 DNA repair and recombination proteins [BR:
smia03400
]
P344_01805
Enzymes [BR:
smia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P344_01805
Transcription machinery [BR:
smia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P344_01805
DNA repair and recombination proteins [BR:
smia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P344_01805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RNA_pol_L_2
HHH_5
Spectrin_7
DUF1283
Motif
Other DBs
NCBI-ProteinID:
AHI57709
UniProt:
W0GQ50
LinkDB
All DBs
Position
275262..276215
Genome browser
AA seq
317 aa
AA seq
DB search
MKQFIRPEFKLEVEDKSNNYGKFLVEPLERGFGITLGNALRRTLLSSTPGAAVFAIRIKG
ASHEFTAIPGIVEHVTKIILNIKNLVLKIDQNIIPDGESVILKINSNKEGDVLAKDIELP
AGVEVINTDLHIATIAKGGELNLELHARNSRGYKSFNDNKKEKKYADLIVIDSNYSPVQK
VSYTVEPTKVGKNADLEKLEIEVQTDSSITPVNAIAMAGKILSEHLEFFINLNEAIKTTQ
VISSETEKEEDELDRSIDELEFTQRSQNCLKRAKIETLRDLISKTEEEIQEIRNLGKKSL
TEIKEKVAALGLYFRRD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatttattagaccagaatttaaattagaagtggaagacaaatcaaacaattat
ggaaaatttttagttgaaccattagaacgtggatttggaattaccctgggaaatgcattg
cgcagaacattgttatcttcaacacccggggcggcagtgtttgccatccgtattaaagga
gcctcacatgaatttaccgcaattcccggtattgtcgaacatgttacgaaaattatttta
aatattaaaaaccttgtgttaaaaattgatcaaaatattattcccgatggggagtcagta
attttaaaaattaattctaacaaggaaggtgatgtgttagcaaaagatattgaattacca
gccggtgttgaagtaatcaatacggatttacatattgccacaattgcgaagggtggagaa
ttaaacttagaattacatgctcgtaattctcggggatataaatcatttaatgataataaa
aaagaaaagaaatatgcggacttaattgtcattgattcaaactattcaccagtgcaaaag
gtttcttatacggtggaaccaaccaaagtaggaaaaaatgctgatttagaaaaattagaa
attgaagtccaaactgatagttcaattacaccggttaatgctattgcaatggcgggtaaa
attttatcggaacacttagaattctttattaacttaaatgaagcaatcaaaacaacccaa
gttatttcatctgaaactgaaaaagaagaagatgaattagatcgtagtattgatgagtta
gaatttactcagcgttcacaaaactgtttgaaacgtgctaaaattgaaacacttcgtgat
ctaatatcaaaaaccgaagaagaaatccaagaaattcgaaacttaggtaaaaaatcatta
actgaaattaaagaaaaagtagccgctttaggtttatattttagaagagattaa
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