Spiroplasma mirum ATCC 29335 SMCA: P344_01855
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Entry
P344_01855 CDS
T03382
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smia
Spiroplasma mirum ATCC 29335 SMCA
Pathway
smia03420
Nucleotide excision repair
smia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P344_01855
03430 Mismatch repair
P344_01855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smia03400
]
P344_01855
Enzymes [BR:
smia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P344_01855
DNA repair and recombination proteins [BR:
smia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P344_01855
MMR (mismatch excision repair)
Other MMR factors
P344_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHI57719
UniProt:
W0GQ59
LinkDB
All DBs
Position
287094..289298
Genome browser
AA seq
734 aa
AA seq
DB search
MLNEFIKDLNPNQREAVLAINGPVRVIAGAGSGKTRVIINKIAYLVRYGNHKPWRICALT
FTNKAANEMKNRIVNLIGQEGRKTWISTYHALCVRILREDIETLGYPRSFKIIDTTDQDQ
IIRAIYKSANLKYDAQESWMVKSQISSWKNDFYSPSQVIDGAYENSDKKRWGYVYKEYEK
RLKELNSLDFNDLILFTHRLFSYHKDILAKWQDRFDYLLVDEFQDTNDLQFDIIKWLSET
KKNITVVGDPDQTIYSWRGAKIRLILNFEHYFKETQTIILDENYRSSQNILSLANDLIVN
NANRIKKELFTSKELGVKPILYHASSSLDESDFVASKINQLVKKENYHYQDILILYRANY
LSRDIEGSLADYGISYRIYGAFKFYERKEIKDALALLKLVVNNEELSLDRVLLFTPKIGP
KAVEQVKAILKEHQLSFNQLLLDHFDLLPNSLKNNLTALSEAIFDANSLLQDTQSVKIVI
ETLLEKSGYLKRLQDNLETERVENIKELIDGIAKFDFQNSDLQGLELVNEYLQLISLQTD
HDNDEINDDSVSLMTIHNAKGLEKKVVFIVGLNEGIFPSIQAIKSGESELEEERRTLYVA
ITRAKELLFISYADGYSYVTGNERFPSRFVKELNPDFLEIIESDLLGTTVKYKSNYSLDS
EWENSLNNFSNKALNTRSQSAQENWSIDDGVSHEIFGIGVVVKKIGSNIQVIFPSPIGSK
IISADSKAIKKVKN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgaatttattaaagatttgaatcctaaccaacgcgaagcggtcttagcaatt
aatggaccggtccgggtaattgccggggctggcagtggtaaaacacgcgttattattaat
aaaattgcttatttagttcgttatggaaatcacaaaccatgaagaatttgtgcattaacg
tttactaataaggcagctaatgaaatgaaaaaccgaattgttaatttaattggtcaagag
ggccgaaaaacttgaatttccacttaccatgccctgtgtgttcgtattttacgcgaagat
attgaaaccttaggttatccgcgcagttttaaaattattgataccaccgaccaagaccaa
attattagagcaatctataagtcggcaaacttaaaatatgatgcccaagaaagttggatg
gtaaagtcgcaaattagtagttgaaaaaatgatttttattcaccaagtcaagtcattgat
ggggcttatgaaaatagtgataaaaaacgatgaggctatgtttataaagaatatgagaaa
agactaaaagaattaaatagtttagattttaatgatttaattttgtttacccatcgttta
ttttcttaccataaagacatcttagcaaaatgacaagatcgttttgattatttattagtc
gatgagttccaagatacgaatgatttacaatttgatattatcaaatgattatcagaaaca
aaaaaaaatattactgtggttggtgatcctgaccaaacaatttattcgtggcggggagct
aaaattcggttaattttaaactttgaacattattttaaagaaacccaaacaattatttta
gacgaaaactatcgttctagtcaaaatattctatcactcgcaaatgatttaattgttaat
aatgctaatcgtattaaaaaagaattgtttactagtaaagaattgggtgtcaaaccaatt
ttgtaccatgctagcagtagtttagatgaaagtgattttgttgccagcaaaattaaccaa
ctggtgaaaaaagagaactaccactaccaagatattttaatattatatcgcgctaactat
ttatcccgtgatattgaaggctcccttgctgattatgggatttcttatcgaatttatggg
gcctttaaattttacgaacggaaagaaattaaagatgccttagcactattaaaattagta
gttaataatgaagaactctctttagatcgggtgctattatttactcctaaaattggacca
aaagcagtggaacaggtgaaagcaattctcaaagagcatcagttaagttttaaccaatta
ttacttgatcattttgatttattaccaaatagtttaaaaaataatttaacggcgcttagt
gaagcaatttttgatgctaatagtttattacaagacacccaaagtgttaaaatagtcatt
gaaaccttactagaaaaatcaggttatctaaaacgccttcaagataatttagaaactgaa
cgcgtagaaaatattaaagaattaattgacgggattgctaaatttgacttccaaaattct
gatttgcaaggtctcgaattagttaatgaatacttacaattaattagtttacaaactgac
catgataatgatgaaattaatgatgatagtgtttcattaatgacaattcataatgcgaaa
ggtttagagaaaaaagttgtttttattgttggtcttaatgaaggtatttttccttcaatt
caagcaattaagagtggtgaaagtgaattagaagaagagcgccgaactttatatgtcgca
atcaccagggcaaaagaactcttatttattagttatgcggatggttattcatatgttacc
gggaatgaaagattcccttcgcggtttgttaaagagttaaatccggattttttagaaata
attgagagcgatttattaggaacaactgttaagtataaaagtaattatagtttagatagc
gaatgagaaaatagtttaaataatttttcgaataaggcccttaacacaaggtcacaatcc
gcccaggaaaattgatccattgatgatggtgttagtcatgaaatttttgggattggcgtt
gttgttaaaaaaatcggatctaacattcaagttatttttcccagtccgattggttcaaaa
attatttcagctgatagtaaagctattaaaaaagttaagaattag
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