Spiroplasma mirum ATCC 29335 SMCA: P344_02455
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Entry
P344_02455 CDS
T03382
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smia
Spiroplasma mirum ATCC 29335 SMCA
Pathway
smia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P344_02455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smia03019
]
P344_02455
03009 Ribosome biogenesis [BR:
smia03009
]
P344_02455
Enzymes [BR:
smia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P344_02455
Messenger RNA biogenesis [BR:
smia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P344_02455
Ribosome biogenesis [BR:
smia03009
]
Prokaryotic type
rRNA helicases
P344_02455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
Cas3-like_C_2
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
AHI57838
UniProt:
W0GP55
LinkDB
All DBs
Position
386454..387737
Genome browser
AA seq
427 aa
AA seq
DB search
MNFNKLNLKQELHRAILKTGYVKATEIQQKAIPVAIDNYDIIGKSHTGTGKTAAFVLPIL
HNLDVNLKKPQAIILCPTRELATQVLDQVRKYALFLHGVNATLLCGGSQIKSQIYALKKA
NVVVGTPGRIADHLHRHTLRLNNIKTIVLDEADEMLKMGFKKDIDLVFNNAPQNYQTLLF
SATMSKPVLEITNTYQKNPVSITIQKNADEQNNIDQYYINTYGLNKEEVLIKLYQDLKPK
LSIIFSNTKMYTEKIAKLLTNNGIKSRVINGDKKQVDRYRSMQAFRNHEVRVLIATDVAA
RGIDVDGIDYVFNYDLPVELESYTHRIGRTARAGAKGTAITFINSRNSLNELRKIEQYQK
KQINPYDISSYNFTKDYAKAPTNAPLKFKKTFGSKNNRSWNKPAKYKKEWTNHHQEYQFN
RSFKKTK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaataaattaaatttaaaacaagaattgcatcgcgcaattttaaaaacgggt
tatgtgaaagctacggaaattcaacaaaaagcaattccagttgccattgataattatgac
attattggaaaatcacataccggaactggcaaaacagcagcgtttgttttaccaatctta
cataatttagatgttaacttaaaaaaaccacaagcaataatattatgtccaacccgcgaa
ttagcaacccaagtgctagatcaggttcgtaaatacgcgttatttttacacggcgtaaat
gctacattattatgtggaggatcacaaataaaaagtcaaatttatgctttaaaaaaagca
aatgtggtggttggaacaccagggcggattgcagatcatcttcatcgtcacactttacgc
ttaaataatatcaaaacaattgttctagatgaagccgatgaaatgctaaaaatgggcttt
aaaaaagatattgatttagtttttaataatgcccctcaaaattaccaaaccttattattt
tcagcaacaatgtcaaaaccagtgctggaaattactaatacttatcaaaaaaatccggtt
agtattactatccagaaaaatgctgatgaacaaaataacattgatcagtactatattaac
acttatgggttaaacaaagaagaagtgttaattaagttatatcaagatttaaaaccaaaa
ttaagtattatcttttccaatactaaaatgtatactgaaaaaattgcaaaattattaact
aataatgggattaaatcacgggttattaatggtgataaaaaacaagttgatcgttaccgt
tcaatgcaagcttttcggaaccatgaagttagggtgttaattgcgacagatgttgccgcc
cgggggattgatgttgatggtattgattatgtttttaactatgatttacccgttgaacta
gaaagttatacccaccggattgggcgaactgctagagcgggagccaaaggaacagcaatt
acttttattaattcgcgtaatagtcttaatgaattacgcaaaattgaacaatatcaaaag
aaacaaattaacccatatgatattagtagttataatttcacaaaagattatgcaaaagca
cctactaacgctcctctaaaatttaaaaaaacgtttggtagtaaaaataaccgttcatga
aataaaccagcaaaatataaaaaagaatgaactaaccaccatcaagaatatcaatttaat
cgtagttttaaaaaaactaaataa
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