Spiroplasma mirum ATCC 29335 SMCA: P344_04895
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Entry
P344_04895 CDS
T03382
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
smia
Spiroplasma mirum ATCC 29335 SMCA
Brite
KEGG Orthology (KO) [BR:
smia00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P344_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smia03021
]
P344_04895
Transcription machinery [BR:
smia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P344_04895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AHI58301
UniProt:
W6AMS9
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All DBs
Position
complement(771806..773164)
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AA seq
452 aa
AA seq
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MMLSKKEVKNMKSFEEFKEYINKFLEENNNEIEQEKVLELINEHFELEDNDVDEYFEELL
ANGVEFSDVNLDTEDLTEDLEDNSAAISDEKTAKKPREDRIKYKVGGISNETKIQDIIKA
YFNVLGTSKILTRDEEIKYAKMLESSDPEEKKYGREKLITSNLKLVVSVARKHLNRGLDF
SDLIEEGNIGLMKAVDKFDYTRGFKFSTYATWWIRQAITRAIADQGRTIRIPVHMVETIN
KLTRIERQLTQELGREPTFDEIADRMRQGMTGEKVREIKRLSIKPVSLEKPIGDEDDTHF
GDFVDNKDIFTPDEYAEKESLREVIDEVFHEILSAREEKVIRMRFGILPTKLRTVLRLAK
ESEDESFPELVQTVKSLDIHYDTPIEKVQSRKNKIIDKHLSKYDSPKTLEEVGKEFKVTR
ERIRQIEAKTIRKFKPNQSNSKAKVLKDFFKG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatgttatcaaaaaaagaagttaaaaacatgaaatcatttgaagaatttaaggaatat
attaataaatttcttgaagaaaataacaatgaaattgaacaagaaaaagtattagagtta
attaatgaacattttgaattagaagataatgatgttgatgaatattttgaagaattattg
gctaatggtgttgaatttagtgatgtaaatttagacaccgaagatttaactgaagattta
gaagataactcagctgcaattagcgatgaaaaaaccgcaaaaaagccacgggaagatcgc
attaaatataaggtcgggggaatttctaacgaaacaaaaattcaagatattattaaagct
tattttaatgtgttaggaacaagtaaaattttaactcgggatgaagaaattaaatatgct
aaaatgttagaatctagtgatcctgaagaaaaaaaatatggtcgcgaaaaattaattact
tctaacttaaaacttgtggtatcagtggcgcggaaacatttaaaccgtggtttagatttt
tcggatttaattgaagaaggtaatattggattaatgaaagcagttgataagtttgattat
acgagaggatttaaattctcaacttatgcaacgtgatgaattcgtcaagccattactaga
gccattgccgaccaggggcgaacaattagaattcctgttcatatggttgaaacaattaac
aagttaacaagaattgaacggcaattaacccaagaattaggacgggaacctacttttgat
gaaattgctgaccgtatgaggcaaggaatgacaggggaaaaagttcgggaaattaaacga
ttatcaattaaaccagtatcattagaaaaaccaattggggatgaagacgatactcatttt
ggtgactttgttgataataaagatatttttacgcctgatgaatatgctgagaaagaatca
ttacgcgaagttattgatgaagtttttcatgaaattttatccgcgcgggaagaaaaggtg
attcgtatgcgctttggaattttaccaacaaaattacgaactgtcctacgcttagcaaaa
gaaagtgaggatgaatcattcccagaacttgtccaaactgttaaaagtttagatattcac
tatgacactccgattgaaaaagttcaaagtcgtaaaaataaaattattgataaacactta
tcaaaatatgattcgccaaaaacattagaagaggttggaaaagagtttaaagttacccgt
gaacggattcgtcagattgaagccaaaacaattcgtaagtttaaacctaatcagtcaaat
tcaaaagcaaaagttttgaaagatttctttaagggttaa
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