Streptomyces mirabilis: SMIR_04290
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Entry
SMIR_04290 CDS
T10322
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smib Streptomyces mirabilis
Pathway
smib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMIR_04290 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smib03400
]
SMIR_04290 (xth)
Enzymes [BR:
smib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SMIR_04290 (xth)
DNA repair and recombination proteins [BR:
smib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SMIR_04290 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QUW78451
LinkDB
All DBs
Position
complement(939912..940691)
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AA seq
259 aa
AA seq
DB search
MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAAEQFPVDELRELGYEAAVHATG
RWNGVAVLSRVGLEDVVKGLPGDPGYEGVEEPRAVSATCGPLRVWSVYVPNGREVDHPHY
AYKIQWFEALKAAVAGDAAGSRPFAVLGDYNVAPTDDDVWDISLFEGATHVTPAERAALA
ALRESGLSDVVPRPLKYDHPFTYWDYRQLGFPKNRGMRIDLVYGNEPFAKAVTDSYVDRE
ERKGKGASDHAPVVVDLDV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctggaacgtgaactcgatcaccgctcgcctcccgaggctgctggcc
tggctggagagcagcggcacggacgtgctgtgcctccaggaggccaaggtcgccgccgag
cagttccccgtcgacgagctgcgcgagctgggctacgaggcggcggtccacgcgaccggg
cggtggaacggcgtggcggtgctctcccgcgtcggcctggaggacgtggtcaaggggctg
cccggcgaccccggttacgagggcgtcgaggagccccgggccgtctccgcgacctgcggc
ccgctccgcgtctggtcggtgtatgtgccgaacggacgcgaggtggaccacccccactac
gcctacaagatccagtggttcgaggccctcaaggccgcggtcgcgggcgacgcggcgggc
agccgccccttcgccgtgctgggtgactacaacgtggcgccgacggacgacgacgtctgg
gacatctccctcttcgagggggccacccacgtcaccccggccgagcgggccgccctcgcc
gcgctgcgcgagtcgggcctgtcggacgtggtcccgcggcccctcaagtacgaccacccg
ttcacgtactgggactaccgccagctcggcttccccaagaaccgaggcatgcgcatcgac
ctggtctacggcaacgagccgttcgccaaggcggtcaccgactcctatgtggaccgcgag
gagcgcaagggcaagggcgcgtcggaccacgcgcccgtcgtggtggacctcgacgtgtga
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