KEGG   Streptomyces mirabilis: SMIR_12815
Entry
SMIR_12815        CDS       T10322                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
smib  Streptomyces mirabilis
Pathway
smib00521  Streptomycin biosynthesis
smib00523  Polyketide sugar unit biosynthesis
smib00525  Acarbose and validamycin biosynthesis
smib00541  Biosynthesis of various nucleotide sugars
smib01055  Biosynthesis of vancomycin group antibiotics
smib01100  Metabolic pathways
smib01110  Biosynthesis of secondary metabolites
smib01250  Biosynthesis of nucleotide sugars
Module
smib_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:smib00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    SMIR_12815 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SMIR_12815 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    SMIR_12815 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SMIR_12815 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    SMIR_12815 (rfbB)
Enzymes [BR:smib01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SMIR_12815 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_10 NAD_binding_4 NmrA
Other DBs
NCBI-ProteinID: QUW79900
LinkDB
Position
complement(2943651..2944622)
AA seq 323 aa
MRILVTGGAGFIGSEYVRRRLNSDPTARITVLDKLTYSGVEANLAPVAEHPGYTFVRGDI
CDPGVVDQVIAGQDAVVHFAAESHVDRSIDGAGPFVRTNVMGTQVLLDAAHRHGVGRFVH
VSTDEVYGSISEGSWTEGWPLAPNSPYSASKAGSDLLALAYHRTHGLDVVVTRCTNNYGP
YQFPEKVVPLFITNLIDGNTVPLYGDGRNLRDWLHVSDHCRGIDLVLHGGRAGEVYHIGG
GTELSNHKLTGLLLDAVGAGWDRVEYVADRKGHDLRYSLDDSKIREQLGYAPQVSFTEGL
AATVAWYREHRSWWEPLKERAVL
NT seq 972 nt   +upstreamnt  +downstreamnt
atgcgcatccttgtgaccggcggcgctggattcatcggttcggaatacgtccggcggcgg
ctgaattcggacccgacagcgcggatcaccgtcctcgacaaactcacctattcgggggtc
gaggcaaatctggcaccggtggctgaacacccgggctacaccttcgtgcggggcgacatc
tgcgacccgggtgtcgtcgaccaggtgattgcgggccaggacgcggtggtccatttcgcc
gccgagtcgcatgtggaccggtcgatcgacggggccggtccgttcgtccgcaccaatgtg
atgggcacgcaggtgctcctggacgcggctcaccggcacggcgtcggccgcttcgtccat
gtgtccaccgacgaggtgtacggctcgatcagcgaaggctcgtggaccgaggggtggccc
ctggcgcccaactccccctactccgcgtcgaaagccggctccgacctgctggcgctcgcc
taccaccgcacccacggcctggatgtcgtggtcacccggtgcaccaacaactacgggccg
taccagtttcccgagaaggtcgtcccgctcttcatcaccaacctgatcgacgggaacacg
gtccccctgtacggagacggccgcaacctccgcgactggctgcacgtctccgaccactgc
cggggcatcgacctggtcctgcacggcggcagggccggggaggtctaccacatcggcggc
gggaccgagctcagcaaccacaagctcaccggcctgctgctggacgcggtcggcgcgggc
tgggacagggtcgagtacgtggccgaccgcaaaggccacgacctgcgctactcgctggac
gacagcaagatccgcgagcaactcggctacgcgccgcaggtgtcgttcacggagggcctg
gccgccacggtcgcctggtaccgcgaacaccgctcctggtgggagccgctgaaggagagg
gccgtgctgtga

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