Streptomyces mirabilis: SMIR_12815
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Entry
SMIR_12815 CDS
T10322
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
smib Streptomyces mirabilis
Pathway
smib00521
Streptomycin biosynthesis
smib00523
Polyketide sugar unit biosynthesis
smib00525
Acarbose and validamycin biosynthesis
smib00541
Biosynthesis of various nucleotide sugars
smib01055
Biosynthesis of vancomycin group antibiotics
smib01100
Metabolic pathways
smib01110
Biosynthesis of secondary metabolites
smib01250
Biosynthesis of nucleotide sugars
Module
smib_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SMIR_12815 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SMIR_12815 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SMIR_12815 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SMIR_12815 (rfbB)
00525 Acarbose and validamycin biosynthesis
SMIR_12815 (rfbB)
Enzymes [BR:
smib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SMIR_12815 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
NmrA
Motif
Other DBs
NCBI-ProteinID:
QUW79900
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Position
complement(2943651..2944622)
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AA seq
323 aa
AA seq
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MRILVTGGAGFIGSEYVRRRLNSDPTARITVLDKLTYSGVEANLAPVAEHPGYTFVRGDI
CDPGVVDQVIAGQDAVVHFAAESHVDRSIDGAGPFVRTNVMGTQVLLDAAHRHGVGRFVH
VSTDEVYGSISEGSWTEGWPLAPNSPYSASKAGSDLLALAYHRTHGLDVVVTRCTNNYGP
YQFPEKVVPLFITNLIDGNTVPLYGDGRNLRDWLHVSDHCRGIDLVLHGGRAGEVYHIGG
GTELSNHKLTGLLLDAVGAGWDRVEYVADRKGHDLRYSLDDSKIREQLGYAPQVSFTEGL
AATVAWYREHRSWWEPLKERAVL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttgtgaccggcggcgctggattcatcggttcggaatacgtccggcggcgg
ctgaattcggacccgacagcgcggatcaccgtcctcgacaaactcacctattcgggggtc
gaggcaaatctggcaccggtggctgaacacccgggctacaccttcgtgcggggcgacatc
tgcgacccgggtgtcgtcgaccaggtgattgcgggccaggacgcggtggtccatttcgcc
gccgagtcgcatgtggaccggtcgatcgacggggccggtccgttcgtccgcaccaatgtg
atgggcacgcaggtgctcctggacgcggctcaccggcacggcgtcggccgcttcgtccat
gtgtccaccgacgaggtgtacggctcgatcagcgaaggctcgtggaccgaggggtggccc
ctggcgcccaactccccctactccgcgtcgaaagccggctccgacctgctggcgctcgcc
taccaccgcacccacggcctggatgtcgtggtcacccggtgcaccaacaactacgggccg
taccagtttcccgagaaggtcgtcccgctcttcatcaccaacctgatcgacgggaacacg
gtccccctgtacggagacggccgcaacctccgcgactggctgcacgtctccgaccactgc
cggggcatcgacctggtcctgcacggcggcagggccggggaggtctaccacatcggcggc
gggaccgagctcagcaaccacaagctcaccggcctgctgctggacgcggtcggcgcgggc
tgggacagggtcgagtacgtggccgaccgcaaaggccacgacctgcgctactcgctggac
gacagcaagatccgcgagcaactcggctacgcgccgcaggtgtcgttcacggagggcctg
gccgccacggtcgcctggtaccgcgaacaccgctcctggtgggagccgctgaaggagagg
gccgtgctgtga
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