Streptomyces mirabilis: SMIR_14025
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Entry
SMIR_14025 CDS
T10322
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smib Streptomyces mirabilis
Pathway
smib03420
Nucleotide excision repair
smib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMIR_14025 (pcrA)
03430 Mismatch repair
SMIR_14025 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smib03400
]
SMIR_14025 (pcrA)
Enzymes [BR:
smib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMIR_14025 (pcrA)
DNA repair and recombination proteins [BR:
smib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMIR_14025 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SMIR_14025 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Tn7_Tnp_TnsA_C
Motif
Other DBs
NCBI-ProteinID:
QUW80102
LinkDB
All DBs
Position
complement(3206778..3209336)
Genome browser
AA seq
852 aa
AA seq
DB search
MSSLFDDSFLADLQPSGAHEEEPPPPPEDGAPEPLPDDLFGGRFDVPASRDAYYRDGAPR
PAVDPAALLDGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLGERHVHPGQIL
AITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAMY
QSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVRELV
GPAAGDRPEDAPPAEGELGPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLE
QNYRSTQTILSAANAVIERNESRRPKNLWTNAGAGSNITGYVADTEHDEAQFVADEIDRL
TDAGEARAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLA
NPEDSVPMRRILNVPKRGIGERAEAMIDALSQREKISFSQALRRVDEAYGMAARSTNAVK
RFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALE
FEQETGEGEGEGTGATAGTADVGAGAAAGAGTASGGLSAFLERVALVADSDQIPDEEDGN
GVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRALGQVKELEEERRLAYVGITRARERLY
LTRSSMRSAWGQPSYNPPSRFLEEIPETHLEWKRTGATAPVSSGPVSGVAASLSSSRSRS
AASGASGFATRRGISEKQVVSLAVGDRVTHDQFGLGTVVGVKGTGANAEATVDFGEAKPK
RLLLRYAPVEKL
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagctttctggcggacctccagccttccggggcccacgag
gaagagcccccgccgccgcccgaggacggggcgccggagccgcttccggacgacctgttc
ggcggccgcttcgacgtgcccgcgagccgggacgcctactaccgcgacggcgcgccccgc
cccgccgtggacccggcggccctgctggacgggttgaacgagaaccagcgcgcggccgtg
gtgcactccggctccccgctgctcatcgtggccggcgcgggctccggcaagacccgggtg
ctcacccaccgcatcgcccatctgctgggcgagcgtcatgtccaccccggccagatcctc
gcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgtgtcgagcagctcgtc
ggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcgtgtgtgcggatcctg
cgccgcgagagcaagaagctcggcttcacctcctcgttctcgatctatgacgccgccgac
agcaagcggctgatggcgctcgtctgccgtgacctggatctcgatcccaagcgcttcccg
cccaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggaggac
ttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgcgatgtac
cagtcgcggctgcgcgaggccaacgcgctcgacttcgacgacctgatcatgaccacggtc
aacctgctgcgcgccttcccggacgtcgccgagcactaccggcgccgcttccgccacgtc
ctggtcgacgagtaccaggacacgaaccacgcgcagtacgccctggtcagggagctcgtc
ggcccggccgccggtgaccggcccgaggacgcgccgcccgccgagggcgagctcgggccc
gccgagctgtgcgtcgtgggcgacgccgaccagtcgatctacgccttccgcggcgcgacc
atccgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggag
cagaactaccgctccacccagacgatcctgtccgccgccaacgcggtcatcgagcgcaat
gagtcccgccgccccaagaacctgtggaccaacgcgggcgccggttcgaacatcaccggc
tatgtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgtctc
accgacgcgggcgaggccagggcgggcgacgtcgccgtcttctaccggacgaacgcccag
tcccgtgtcttcgaagagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggc
gtccgcttctacgagcgcaaggaggtccgggacgtcctcgcgtacctgagggtcctggcc
aaccccgaggactcggtcccgatgcgccgcattctgaacgttcccaagcgcgggatcggc
gagcgcgccgaggccatgatcgacgcgctctcgcagcgcgagaagatcagcttctcgcag
gcgctgcgccgtgtcgacgaggcgtacgggatggcggcgcggtcgacgaacgccgtgaag
cggttcaacacgctcatggaggacctccgcacgatcgtcgagtccggcgcgggtccggcg
accgtcctggaggcggtgctcgagcgcaccggctacctcgccgagctgcaggcctcgacc
gacccgcaggacgagacccggatcgagaaccttcaggagctcgcagccgtggccctggag
ttcgagcaggagaccggcgagggcgaaggcgaaggcacgggggcgactgcgggtacggcg
gatgtcggcgccggtgcggctgcgggtgctggtacggcgtccggtgggctctccgcgttc
ctggagcgggtcgcgctcgtcgccgactccgaccagatcccggacgaggaggacggcaac
ggcgtcatcaccctgatgaccctccacaccgccaagggcctggagttcccggtcgtcttc
ctcaccggcatggaggacggcgtcttcccgcacatgcgcgcgctgggacaggtcaaggag
ctggaggaggagcggcgcctcgcgtacgtcggcatcacgcgcgcgcgggagcggctgtac
ctcacccgttcgtccatgcgcagcgcctggggtcagccctcctacaacccgccgtcccgt
ttcctggaggagatcccggagacgcacctggagtggaagcgcaccggtgcgaccgctccg
gtgtcctcggggcccgtctccggtgtggccgcctcgctgtcgtcctcgcgttcgcggtcc
gcggcgtccggcgcctccggcttcgcgacgcgccgcgggatctcggagaagcaggtggtc
tcgctggcggtcggcgaccgggtcacccatgaccagttcggcctgggcaccgtggtcggc
gtgaagggaacgggcgcgaacgcggaggcgacggtcgacttcggcgaggcgaagccgaag
cggttgctgctgcggtacgcgccggtggagaagctgtag
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