Streptomyces mirabilis: SMIR_14485
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Entry
SMIR_14485 CDS
T10322
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smib Streptomyces mirabilis
Pathway
smib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMIR_14485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smib03021
]
SMIR_14485
03400 DNA repair and recombination proteins [BR:
smib03400
]
SMIR_14485
Enzymes [BR:
smib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMIR_14485
Transcription machinery [BR:
smib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMIR_14485
DNA repair and recombination proteins [BR:
smib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMIR_14485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QUW80182
LinkDB
All DBs
Position
complement(3311862..3312884)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgccgc
acgctcctctcctcgatcccgggtgcggcggtcacgtccatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgttcagaacaagcaggtcggtcaggagatcggg
cgcatcccggtcgactcgatctactcgccggtgctgaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctcgccgcggacctcgcgctgccgatcgaggagctcgagctcaccgttcgttcc
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctcctggacatccgcaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgaccccaccgctgcg
gcggacgcgtttggcgcggacgacgacgcggatgcgggctttgtggagaccgagcagtac
taa
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