Streptomyces mirabilis: SMIR_14755
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Entry
SMIR_14755 CDS
T10322
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
smib Streptomyces mirabilis
Pathway
smib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMIR_14755 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smib03021
]
SMIR_14755 (rpoB)
03400 DNA repair and recombination proteins [BR:
smib03400
]
SMIR_14755 (rpoB)
Enzymes [BR:
smib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMIR_14755 (rpoB)
Transcription machinery [BR:
smib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMIR_14755 (rpoB)
DNA repair and recombination proteins [BR:
smib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMIR_14755 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QUW80235
LinkDB
All DBs
Position
complement(3361944..3365429)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRTASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVEA
ALDNGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKVIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGGEAPLDAGILTVEDIISTIKYLVKLHAGETETVGDNGTQIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVTGGVVTDEVDYLTADEEDRFVIAQANAPLTDELRF
EESRVLVRRRGGEVDYVPGEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRCAVDAGDVLKSEKDGVVQEVSADYVTTANDDGTYTTYRLHK
FSRSNQGTSVNQKVVVDEGARVVAGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADDWAQRLQAIEADVVAPGTNVATP
VFDGAREDELAGLLNHTIPNRDGERMVLPSGKAPLFDGRSGEPFPEPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcactgcctcgaccgcgaatacgaacaacggcgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaaccttcttgcgctg
caaaccgagagcttcgactggctgctcggcaacgacgcgtggaaggctcgtgtcgaggcg
gctctggacaacggacaggacgtccccacgaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtccctgacgttccgggaccaccgcttc
gagcccccgaagaactccatcgacgagtgcaaggaccgcgacttcacgtacgcggccccg
ctcttcgtcactgccgagttcaccaacaatgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgctcgccgggcgtctacttcgactcctcgatcgac
aagacgtccgacaaggacatcttctccgcgaaggtcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtcaccgttctcctgaaggctctcggttggacgaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagcccccgacccgcgaggccgcg
cagacgcttcttgagaacctctacttcaacccgaagcgctacgacctcgcgaaggtcggc
cgctacaaggtcaacaagaagctgggcggcgaggccccgctggacgccgggatcctgacc
gtcgaggacatcatctcgacgatcaagtacctggtgaagctgcacgccggtgagaccgag
accgtcggtgacaacggcacgcagatcgtcgtcgagacggacgacatcgaccacttcggc
aaccgtcgtctgcgcaacgtcggcgagctcatccagaaccaggtccgcacgggtctggct
cgtatggagcgcgtcgtccgcgagcgcatgacgactcaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccctcgcactacggccgcatgtgcccgatcgagacccctgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgcgtcaacgcgttcggtttcgtcgagacg
ccgtaccgcaaggtcaccggcggtgtcgtcaccgacgaggtcgactacctcacggccgac
gaagaggaccgattcgtcatcgcgcaggccaacgcgccgctgacggacgagctccgcttc
gaggagtcccgcgtcctggtccgccgtcgtggtggagaggtcgactacgtccccggtgag
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtgccgctcatcaagtccgaggcgccgctggtcggcaccggcatggagtaccgctgt
gcggtcgacgccggtgacgtactgaagtcggagaaggacggtgtggtccaggaggtctcc
gcggactacgtcaccaccgccaacgacgacggcacgtacaccacgtaccgcctgcacaag
ttctcccgctcgaaccagggcacctccgtcaaccagaaggttgtcgtggacgagggcgcc
cgggtcgtcgccggtcaggttctggccgacggcccggcgaccgagaacggcgagatggcg
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtcgccggcgacatcctggtcggcaaggtcacgcccaagggtgagaccgagctg
accccggaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtgcgcgac
acctcgctgaaggtgccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgtgaagagggcgacgagctgccgccgggcgtgaaccagctggttcgtgtctacgtggcg
cagaagcgcaagatcacggacggtgacaagctcgccggccgtcacggcaacaagggtgtc
atctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctcggtgtcccgtcccgaatgaacccgggacaggtgctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggtctcgcggacgactgggcg
cagcgcctgcaggccatcgaggccgatgtggtcgcccccggcaccaacgtcgccaccccc
gtgttcgacggtgcgcgtgaggacgagctggccggtctgctgaaccacacgatcccgaac
cgcgacggcgagcgcatggtgcttccgtccggcaaggcgccgctgttcgacggccgctct
ggcgagccgttcccggagccgatctcggtcggctacatgtacatcctcaagctccaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcgtacggcgccgcttacgccctccaggagctgctgaccatcaagtccgacgac
gtgaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtctctctgcctcaacgtg
gaggtgctgtccagcgacggtatgtccatcgaaatgcgtgacaccgacgaggacgtcttc
cgcgcggcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
