KEGG   Streptomyces mirabilis: SMIR_17950
Entry
SMIR_17950        CDS       T10322                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
smib  Streptomyces mirabilis
Pathway
smib00040  Pentose and glucuronate interconversions
smib01100  Metabolic pathways
smib02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smib00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    SMIR_17950
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SMIR_17950
Enzymes [BR:smib01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     SMIR_17950
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: QUW80771
LinkDB
Position
complement(4073470..4074816)
AA seq 448 aa
MASPSHRRSLRKRRAVIVSAAAVTAAGLGAVAFVMNANAGTVDLAHQVLPAKDGWAASGS
GTTGGSQADSSHVYTVSTRAQLVKALGKADNSTPKIIQVKGVIDANTDDSGKKLTCADYS
AGTGYSLAAYLKAYDPAAYGTSKLPSGTQEKARDAAQQKQAKNIVFKVPANTTIVGVPGT
KAGITGGSLQVQSVDNVIIRNLTFSATEDCFPQWDPTDGDSGNWNSAYDAVTLRGATHVW
ADHNTFTDASHFDSANPKYYGREYQIHDGDLDITKGSDLVTVERNQFTNHDKTMLIGSSD
TDSVGKLRVSIHHNVWKGIVQRAPLTRIGQVHIYNNYFDTTTVNGYAPLYSINSRAKAQV
VAEDNYWKVPTGGKISKLLSGDGTGSVAGGGNLVNGTSTDLVAAYNAANSKKLKTTVNWT
PALTAGLQTSAKNLPTELATTTGAVLTS
NT seq 1347 nt   +upstreamnt  +downstreamnt
gtggcatccccctcgcaccgcaggtccctccgcaagcgtcgcgccgtcatcgtctccgcc
gccgccgtcacggccgcgggcctcggcgccgtcgcgttcgtgatgaacgcgaacgcgggt
acggtcgacctcgcgcaccaggtgctgcccgccaaggacggctgggcggcatccgggtcc
gggacgaccggcggctcgcaggccgactcctcgcacgtctacaccgtcagcacccgcgcc
cagctcgtgaaggcgctgggcaaggccgacaactccacgcccaagatcattcaggtcaag
ggtgtcatcgacgccaacaccgacgactcgggcaagaagctgacctgcgccgactactcc
gccggtacggggtactcgctggccgcctatctgaaggcctacgacccggccgcgtacggc
acctccaagctgccttccggcacgcaggagaaggcccgtgacgccgcgcagcagaagcag
gcgaagaacatcgtcttcaaggtgcccgccaacaccaccatcgtgggtgtgccgggcacc
aaggccgggatcaccggtggcagtctgcaggtgcagagcgtcgacaacgtcatcatccgc
aatctgaccttcagcgccaccgaggactgcttcccgcagtgggacccgaccgacggcgac
agcggcaactggaactccgcgtacgacgccgtcaccctgcgcggcgcgacgcacgtgtgg
gccgaccacaacaccttcaccgacgcgtcgcacttcgacagcgccaacccgaagtactac
ggccgcgagtaccagatccacgacggtgacctcgacatcaccaagggctcggacctggtg
accgtcgagcgcaatcagttcaccaaccacgacaagaccatgctgatcggcagcagcgac
accgacagcgtcggcaagctgcgcgtctccattcaccacaacgtgtggaaggggatcgtt
cagagggctcccctgacccggatcgggcaggtgcacatttacaacaactacttcgacacc
acgaccgtcaacgggtacgcgcccctctacagcatcaactcccgcgccaaggcccaggtc
gtcgccgaggacaactactggaaggtcccgacgggcgggaagatctccaagctgctcagc
ggcgacggcaccggctcggtcgccggcggcggcaacctcgtcaacggcacctcgaccgat
ctcgtcgccgcgtacaacgccgcgaactcgaagaagttgaagacgacggtgaactggacg
ccggccctgaccgccggtctccagacctccgcgaagaacctgccgacggagctggccacc
accaccggtgcggtcctgacctcgtag

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