Streptomyces mirabilis: SMIR_17980
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Entry
SMIR_17980 CDS
T10322
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
smib Streptomyces mirabilis
Pathway
smib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SMIR_17980 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smib01007
]
SMIR_17980 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smib03016
]
SMIR_17980 (aspS)
03029 Mitochondrial biogenesis [BR:
smib03029
]
SMIR_17980 (aspS)
Enzymes [BR:
smib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SMIR_17980 (aspS)
Amino acid related enzymes [BR:
smib01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SMIR_17980 (aspS)
Transfer RNA biogenesis [BR:
smib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SMIR_17980 (aspS)
Prokaryotic type
Other AARSs
SMIR_17980 (aspS)
Mitochondrial biogenesis [BR:
smib03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SMIR_17980 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Archaeal_Big
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QUW80777
LinkDB
All DBs
Position
complement(4078777..4080540)
Genome browser
AA seq
587 aa
AA seq
DB search
MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE
ALDKVSKESTVRVDGKVVSRGAENVNPDLPTGEIEVEVSEVELLGAAAPLPFTINAEDGV
NEERRLEYRFLDLRRERMHRNILLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF
VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV
DITDIFEGSEFKAFAGKHVRALPVPDVAGQTRKFFDGLGDYAVEQGAKGLAWVRVGEDGS
LTGPIAKFLTEDNVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVEAAKRSGNFEEN
VFRFCWIVDFPMYEKDEDTGKIDFSHNPFSMPQGGLEALESQDPLDILGWQYDIVCNGVE
LSSGAIRNHEPEIMLKAFEIAGYDRDTVEEQFAGMLRAFRFGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELHLSVRKPQPK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgcgcctctgacgtcggcagcgac
gtccggctgagcggctggctgcacaatcgccgagacctgggcggcatcctcttcatcgat
ctgcgcgatcactacggcatcacgcagctcgtcgcccgacccggcacgcccgcctacgag
gccctcgacaaggtctccaaggagtcgacggtccgcgtcgacggcaaggtcgtctcgcgt
ggcgcggagaacgtcaacccggacctgcccaccggcgagatcgaggtcgaggtgagcgag
gtcgagctgctcggcgccgccgccccgctgccgttcacgatcaacgccgaggacggcgtc
aacgaggagcggcgcctggagtaccgcttcctcgacctgcgccgcgagcgcatgcaccgc
aacatcctgctgcgtacggccgtgatctccgcgatccgtcacaagatgacggcgctgggc
ttcaacgagatggcgaccccgatcctcagcgccacctctcccgagggcgcgcgcgacttc
gtggtcccctcccgtctgaacccgggcaagttctacgccctgccgcaggccccgcagcag
ttcaagcagctgctgatgatctccggcttcgaccgctacttccagatcgcgccctgcttc
cgcgacgaggacgcgcgcgcggaccgctcgccgggcgagttctaccagctcgacgtggag
atgtccttcgtcgagcaggaggacgtcttccagcccatcgagaagctgatgacggagctg
ttcgaggagttcggtggtggccgtcatgtcacctcccccttcccgcgcatcccgttccgc
gaggcgatgctgaagtacggctccgacaagccggacctgcgcgcccagctggagctggtc
gacatcaccgacatcttcgagggctcggagttcaaggccttcgccggcaagcacgtacgt
gccctgccggtgccggacgtcgccggtcagacccggaagttcttcgacggcctcggcgac
tacgcggtcgagcagggcgcgaagggcctggcctgggtccgggtgggtgaggacggctcg
ctgacgggcccgatcgccaagttcctcaccgaggacaacgtcgccgagctgaccaagcgc
ctctccctggcccccggccacgcggtgttcttcggcgcgggcgagttcgacgaggtctcg
aagatcatgggcgcggtgcgggtcgaggccgcgaagcgctcgggcaacttcgaggagaac
gtcttccggttctgctggatcgtcgacttcccgatgtacgagaaggacgaggacaccggg
aagatcgacttctcgcacaacccgttctcgatgccccagggcggcctggaggccctggag
tcccaggatccgctggacatcctgggctggcagtacgacatcgtctgcaacggcgtcgag
ctgtcctccggcgcgatccgcaaccacgagcccgagatcatgctcaaggccttcgagatc
gcgggctacgaccgtgacaccgtcgaggagcagttcgccggcatgctgcgcgcgttccgc
ttcggcgccccgccgcacggcggcatcgccccgggcgtcgaccgcatcgtcatgctcctc
gcggacgagccgaacatccgcgagacgatcgcgttcccgctcaacggcaacgcgcaggac
ctgatgatgggcgcgccgacggagctggacgagacgcggctgcgcgagctgcacctgtcg
gtgcggaagccgcagccgaagtag
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