Streptomyces mirabilis: SMIR_20010
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Entry
SMIR_20010 CDS
T10322
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smib Streptomyces mirabilis
Pathway
smib00040
Pentose and glucuronate interconversions
smib01100
Metabolic pathways
smib02020
Two-component system
smib02024
Quorum sensing
Brite
Enzymes [BR:
smib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
SMIR_20010
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SMIR_20010
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QUW84990
LinkDB
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Position
complement(4518975..4520969)
Genome browser
AA seq
664 aa
AA seq
DB search
MAYGTVFGLFGDDAQPKASAATNTPAWATEAADGFASVHAMGQNGTYGGRDGRTVTVKTL
ADLEKYATSADPYVIVVAATITMDPVGKEIKVASDKTIVGSGTAGQIVGGGFFLGQGVHN
VIIRNLTIRDAYQGIWNDKEHDFDGIQMDGAHHVWIDHNDIRHMADGLIDSRKDTTYLTV
SYNRLSNENKAFGIGWTANTTADITIHHNWIRETEQRNPSTDNVAHAHLYNNYLEDDAGT
AITSSYGNYARGKTNMVLENSYFQGMNNPVIRDSTATLVQRGNVFSGTTGRNESGGSGTP
FDPKTYYKYTLDKAADVPALLKSLAGPRTSLGTTSATPTSSTPTVTGKVLTVAQDGSGQY
RTVQAAVDAVPSNNTARVTISVEPGTYRETVKVPSNKPHITLQGSGGSRKDTVITFGNAA
GTKKADGSTYGTTGSATVAVEGDDFQARNLTIANDFDEAKNQSVLGHQAVALRTGADKVV
LDGVIVSGDQDTLEMETPGSDKPGRVYVTNSYITGNVDFVFGRATAVINKSVINLKKRWD
GSSAGFVTAPSTQADRKGFLITHSTVTGDVAAGSFSLGRNWHAGGDAALRPQTTVRNSTL
SAAIRSNPWSDMGGFSWKNDRFAEYKNSGAGAGAASGERPQLTDAQAAGQSIADWLGDWT
PTAS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacggcacggtgttcggactcttcggcgacgacgcccagccgaaggcgtcggcc
gcgacgaacaccccggcctgggccaccgaggccgccgacggtttcgcctccgtccacgcc
atggggcagaacgggacctacggcgggcgcgacggcaggaccgtcaccgtgaagaccctc
gccgacctggagaagtacgcgacctcggccgacccgtacgtcatcgtcgtcgccgcgacg
atcacgatggacccggtcggcaaggagatcaaggtcgccagcgacaagacgatcgtcggc
tccggcaccgccgggcagatcgtcggcggcggcttcttcctcggtcagggcgtgcacaac
gtcatcatccggaacctgaccatccgcgacgcgtaccagggcatctggaacgacaaggag
cacgacttcgacggcatccagatggacggcgcccaccatgtgtggatcgaccacaacgac
atccggcacatggccgacgggctcatcgacagccgcaaggacaccacgtacctgacggtc
tcgtacaacaggctgagcaacgagaacaaggccttcggcatcggctggaccgccaacacc
acggcggacatcacgatccaccacaactggatccgcgagaccgagcagcgcaacccgtcc
acggacaacgtcgcccacgcccacctctacaacaactacctggaggacgacgcgggcacc
gccatcacgtcctcgtacggcaactacgcgcgcggcaagaccaacatggtcctggagaac
agctacttccagggcatgaacaaccccgtcatccgggacagcaccgcgaccctcgtgcag
cgcggcaacgtcttctccggcaccaccggccgcaacgagagcggcggcagcggtacgccg
ttcgacccgaagacgtactacaagtacacgctggacaaggccgccgacgtgccggcgctc
ctcaagtccctggccgggccgcggacttcgctcggcaccacgtccgccacgccgaccagc
agtaccccgaccgtcaccggcaaggtcctcaccgtcgcccaggacggctccgggcagtac
aggaccgtgcaggccgccgtcgacgccgtaccctcgaacaacaccgcgcgcgtcacgatc
tccgtcgagccgggcacgtaccgcgagacggtgaaggtcccctcgaacaagccgcacatc
accctccagggctcgggcggcagccgcaaggacacggtgatcaccttcggcaacgcggcc
ggtacgaagaaggccgacggatccacgtacgggaccaccggcagcgccaccgtcgccgtc
gagggcgacgacttccaggcccgcaacctcaccatcgccaacgacttcgacgaggcgaag
aaccagagcgtgctcgggcaccaggccgtggccctgcgcaccggtgccgacaaggtcgtg
ctcgacggtgtcatcgtcagcggcgaccaggacaccctggagatggagacccccggctcg
gacaagcccggccgggtctacgtcaccaactcctacatcaccggcaacgtcgacttcgtc
ttcggccgcgccaccgccgtgatcaacaagtcggtcatcaacctgaagaagcgctgggac
ggttcgtccgccggtttcgtcaccgcgcccagcacgcaggcggaccgcaagggcttcctg
atcacccactccacggtgaccggcgatgtcgccgcgggctccttctccctcggccgcaac
tggcacgcgggcggcgacgccgccctcaggccgcagacgaccgtccgtaactccacgctc
agcgccgcgatccggtcgaacccgtggtccgacatgggcggcttctcctggaagaacgac
cgcttcgcggagtacaagaacagcggcgccggcgcgggggccgcgagcggtgagcggccg
cagctgacggacgcgcaggccgcgggccagtcgatcgccgactggctcggcgactggacg
cccaccgcgtcctga
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