Streptomyces mirabilis: SMIR_20610
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Entry
SMIR_20610 CDS
T10322
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smib Streptomyces mirabilis
Pathway
smib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMIR_20610 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smib03019
]
SMIR_20610 (groL)
03110 Chaperones and folding catalysts [BR:
smib03110
]
SMIR_20610 (groL)
03029 Mitochondrial biogenesis [BR:
smib03029
]
SMIR_20610 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smib04147
]
SMIR_20610 (groL)
Enzymes [BR:
smib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SMIR_20610 (groL)
Messenger RNA biogenesis [BR:
smib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SMIR_20610 (groL)
Chaperones and folding catalysts [BR:
smib03110
]
Heat shock proteins
HSP60 / Chaperonin
SMIR_20610 (groL)
Mitochondrial biogenesis [BR:
smib03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SMIR_20610 (groL)
Exosome [BR:
smib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SMIR_20610 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SMIR_20610 (groL)
Exosomal proteins of breast cancer cells
SMIR_20610 (groL)
Exosomal proteins of colorectal cancer cells
SMIR_20610 (groL)
Exosomal proteins of bladder cancer cells
SMIR_20610 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
DUF4844
Motif
Other DBs
NCBI-ProteinID:
QUW81219
LinkDB
All DBs
Position
4641004..4642626
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
KAVEAVSGALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEAVLDDPYILIANSKISNVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENAGLDLLGRARKVVITKDETTIVDGSGSADQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
SSVFEKLELSGDEATGANAVRLALEAPLKQIAVNGGLEGGVIVEKVRNLPVGHGLNAATG
EYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcacggcgcggtctcgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcacccttggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgttctcgcccaggctctcgtccgc
gagggcctgcgcaacgtagccgccggcgccaacccgatggctctcaagcgcggtatcgag
aaggccgtcgaggccgtctccggtgccctccttgagcaggccaaggatgtcgagaccaag
gagcagatcgcttccacggcctccatctccgccgccgacacccagatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcccagacc
ttcggtctggagcttgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
gccaactcgaagatcagcaacgtcaaggacctgctgccgctcctcgagaaggtcatgcag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggctccgggcttcggt
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgcgggtctggacctgctgggccgtgcccgcaag
gtcgtcatcaccaaggacgagaccacgatcgtggacggctccggctccgccgaccaggtc
cagggccgggtcaaccagatccgtgccgagatcgagaactccgactcggactacgaccgc
gagaagctccaggagcgcctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctcatccaggcc
tcctcggtcttcgagaagctcgagctctcgggtgacgaggcgaccggcgccaacgccgtg
cgactcgccctggaggccccgctcaagcagatcgccgtcaacggtggtctcgagggtggc
gtcatcgtcgagaaggtgcgcaacctgcccgtcggccacggcctgaacgccgcgaccggt
gagtacgtcgacatgatcgccgagggcatcatcgacccggcgaaggtgacccgctctgct
ctgcagaacgccgcctccatcgccgcgctgttcctgaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcgccggccggcggcggcatgccgggcggtgacatggacttc
tga
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