Streptomyces mirabilis: SMIR_20725
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Entry
SMIR_20725 CDS
T10322
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
smib Streptomyces mirabilis
Pathway
smib03420
Nucleotide excision repair
Brite
Enzymes [BR:
smib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMIR_20725
Transcription machinery [BR:
smib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SMIR_20725
DNA repair and recombination proteins [BR:
smib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SMIR_20725
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QUW81236
LinkDB
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Position
complement(4666436..4668079)
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AA seq
547 aa
AA seq
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MNGPLIVQSDKTLLLEVDHEQADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEILR
SKRIIPLVGNRIDPDTVAVHPSERGQIKQTLLRLGWPAEDLAGYVDGEAHPIELAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEALVRKFAGQQILVIGQYIDQ
LDELGEHLNAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLADN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggacccctcatcgtccagagcgacaagaccctgctcctggaagtcgaccacgag
caggccgacgcctgccgtcgggccatcgcgccgttcgcggagctggagcgggcgcccgag
cacatccacacctaccgggtgacaccgctcggcctgtggaacgcgcgcgccgcgggccac
gacgccgagcaggtcgtcgacgcgctcgtcgagttcagccgctaccccgtaccgcacgcc
ctgctcgtcgacatcgccgagacgatggaccgctacggacgtctcaccctcagcaagcac
ccggcccacgggctggtcctgaccaccaccgaccggcccgtcctggaggagatcctgcgg
tcgaagcggatcatcccgctcgtcggcaaccggatcgacccggacaccgtggccgtgcac
ccctccgagcgcgggcagatcaagcagacgctgctgagactgggctggccggccgaggac
ctcgccggatacgtcgacggggaagctcacccgatcgagctggcggaggacggctgggca
ctgcggccgtaccagaagcaggccgtggagaacttctggcacggcgggtcgggcgttgtc
gtcctgccctgtggagcagggaagacgctcgtcggcgccggctccatggcgcaggccaag
gccaccaccctcatcctcgtcaccaacaccgtctccgcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcggcacgaggaaggag
atccgcccggtcaccatcgccacctaccaggtgctgacgaccaagcggaagggcgtctat
ccccacctggagctcttcgactcccgggactggggactcatcgtctacgacgaggtgcac
ctgctgcccgcgcccgtcttcaagttcactgccgatctccaggcgcggcggcggctgggc
ctgaccgcgaccctggtccgcgaggacgggcgcgagtcggatgtcttctcgctcatcggg
cccaagcggttcgacgcgccctggaaggagatcgaggcgcaggggtacatcgcgcccgcc
gactgtgtcgaggtccgcgtcaacctcaccgactccgagcggctcgcgtacgcgaccgcc
gagaccgaggagaagtaccgcttctgcgcgacgaccgcgaccaagcggaaggtgaccgag
gcgctggtacggaagttcgcggggcagcagatcctcgtgatcggccagtacatcgaccaa
ctcgacgagctgggcgagcacttgaacgcgcccgtcatcaagggcgagaccagcaacgcg
cagcgggagaagctgttcgacgccttccgggagggcgagatcagcgtgctcgtcgtgtcg
aaggtcgccaacttctccatcgacctgccggaggcgaccgtcgccatccaggtgtcgggc
acgttcggctcgcgccaggaggaggcccagcgccttggccgcgtgctgcgcccgaaggcc
gacggtcaccaggcgcacttctactccgtcgtcgcccgcgacaccatcgaccaggacttc
gccgcgcatcggcagcggttcctggcggagcaggggtacgcctaccggatcgtcgacgcc
gacgaactcctggccgacaactga
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