Streptomyces mirabilis: SMIR_24235
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Entry
SMIR_24235 CDS
T10322
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smib Streptomyces mirabilis
Pathway
smib03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SMIR_24235 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smib03019
]
SMIR_24235 (orn)
03009 Ribosome biogenesis [BR:
smib03009
]
SMIR_24235 (orn)
Messenger RNA biogenesis [BR:
smib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SMIR_24235 (orn)
Ribosome biogenesis [BR:
smib03009
]
Eukaryotic type
Pre-60S particles
RNases
SMIR_24235 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QUW81824
LinkDB
All DBs
Position
complement(5489361..5489963)
Genome browser
AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLSEDALIEVAALVTDSELNVLGEGVDIVIRPPERALETMPDVVR
QMHTASGLLDELAEGTTLADAEAQVLTYVREHVKDPGKAPLCGNSVGTDRGFLSRDMPAL
EDYLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTARAIAAKHVVSAE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccgggctctcgctgtcggaggac
gcactcatcgaggtggccgcgctggtcaccgactcggaactgaacgtgctcggcgaaggg
gtggacatcgtgatccgcccgccggagcgggcgctggagacgatgcctgacgtggtgcgc
cagatgcacacggcctccggcctcctcgacgaactggccgagggcacgactctggccgac
gccgaggcacaggtcctcacctacgtacgtgagcacgtcaaggacccgggcaaggccccg
ctgtgcggaaactcggtcggcacggaccggggtttcctgtcgcgcgacatgccggccctc
gaggactacctccactaccgcatcgtggacgtctcctcggtgaaggagctggcccgccgc
tggtacccccgggcctacttcaacagcccggagaagaacggcaaccaccgcgccctcgcc
gacatccgcgaatccatcgcggagctccgctactaccgcgaggcgatcttcgtcccgcag
cccggccccgactcggacaccgcccgcgccatcgcggcgaagcacgtggtgtccgccgaa
tga
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