Streptomyces mirabilis: SMIR_25645
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Entry
SMIR_25645 CDS
T10322
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
smib Streptomyces mirabilis
Pathway
smib03030
DNA replication
smib03430
Mismatch repair
smib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMIR_25645 (holA)
03430 Mismatch repair
SMIR_25645 (holA)
03440 Homologous recombination
SMIR_25645 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smib03032
]
SMIR_25645 (holA)
03400 DNA repair and recombination proteins [BR:
smib03400
]
SMIR_25645 (holA)
Enzymes [BR:
smib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMIR_25645 (holA)
DNA replication proteins [BR:
smib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMIR_25645 (holA)
DNA repair and recombination proteins [BR:
smib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMIR_25645 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QUW82064
LinkDB
All DBs
Position
5821350..5822336
Genome browser
AA seq
328 aa
AA seq
DB search
MAKKTAQDDPLAPVTLAVGQEDLLLDRAVQEVVAAARAADADTDVRDLTPDQLQPGTLAE
LTSPSLFSERKVVVVRNAQDLSADTVKDVKAYLDAPAEEITLVLLHAGGAKGKGLLDAAR
KVGAREVACPKMTKPADRLAFVRGEFRALGRSAAPEACQALVDSIGSDLRELASAVSQLT
ADVEGTIDEAIVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVAPVLITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGIAVALRAVADADAG
VKGGGDDPEYALEKAVVAIARAARSGRG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagaccgctcaagacgaccctctcgcccccgtcacgcttgccgtgggccag
gaggacctcctgctcgaccgtgccgtgcaggaggtggtggccgccgccagggccgccgac
gccgacacggacgtacgggacctcactccggaccagctgcagcccggcacgctggccgag
ctcacgagtccctcgctcttctccgagcgcaaggtcgtggtcgtacgcaatgcgcaggat
ctgtcggccgacaccgtcaaggacgtgaaggcgtacctggacgcgccggccgaggagatc
accctcgtgctgctgcacgccggtggggccaagggcaaggggctcctcgacgccgcgcgc
aaggtgggggctcgggaggtggcgtgccccaagatgacgaagcctgcggaccggctggcg
ttcgtgcgcggcgagttccgggcgctcgggagatcggccgcgccggaggcgtgccaggcg
ctggtcgactcgatcgggagtgacctgcgggagctggcgtccgcggtgtctcagctgacc
gcggatgtcgaggggacgatcgacgaggccattgtcgggcggtactacaccgggcgggcc
gaggcgtcgagcttcaccgtggccgaccgggccgtggaggggcgggccgcggaggcgttg
gaggcgttgcggtggtctttgtcgaccggggtcgcgcccgtcctgatcaccagtgcgttg
gctcagggggtgcgggcgatcgggaagctgtcctccgcgcgcggggggcggccggccgat
cttgctcgtgagctggggatgccgccgtggaagatcgatcgggtgcggcagcagatgcgg
gggtggacgccggacggtatcgcggttgccctgcgggcggtcgccgatgccgatgccggg
gtgaagggcgggggagatgatcccgagtacgcgctggagaaggcggtcgtagcgatcgct
cgggcggctcggtctggtcggggctag
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