Streptomyces mirabilis: SMIR_30195
Help
Entry
SMIR_30195 CDS
T10322
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smib Streptomyces mirabilis
Pathway
smib03030
DNA replication
smib03430
Mismatch repair
smib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMIR_30195
03430 Mismatch repair
SMIR_30195
03440 Homologous recombination
SMIR_30195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smib03032
]
SMIR_30195
03400 DNA repair and recombination proteins [BR:
smib03400
]
SMIR_30195
Enzymes [BR:
smib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMIR_30195
DNA replication proteins [BR:
smib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMIR_30195
DNA repair and recombination proteins [BR:
smib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMIR_30195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QUW82878
LinkDB
All DBs
Position
complement(6846960..6847979)
Genome browser
AA seq
339 aa
AA seq
DB search
MLEDLTTASSPAPWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTMV
NPERDPGPVWIHGLTTDVLEGAPLFQDIAEEFSDRLADRVLVAHNAVFDWSMIAREYARA
QREAPVRQRLCTIALSKELGLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSL
RAAARDGIRLPLLECRPLKEWSESPAAPRIGRQSGSGGYSSGGYSSGGYPSGSWRPSRKR
PACPYPNPGRYEAGKPLKQGMRVAFSGDTSVDRELLEDRAVEAGLHVATSLSRLTSLLVT
NDPDSSTSKVVKAKQFGTPVIDEAAFGQLLRDVAPASEK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacctgacgaccgcatcgtcaccagccccctggccggccgcgtatccgcag
gggtacgcggtcgtcgacgtggagaccaccggccttgcccgcgacgaccggataatctcg
gccgccgtctaccggctggacgcgcgcggcgaggtcgaggaccactggtacacgatggtc
aacccggagcgggacccgggcccggtctggatccacggtctgacgaccgacgtgctcgaa
ggcgcgccgctcttccaggacatcgccgaggagttctccgaccggctcgccgaccgggtg
ctcgtggcgcacaacgcggtcttcgactggtcgatgatcgcgcgggagtacgcgcgcgcg
cagcgtgaggcgccggtgcgtcagcggctgtgcaccatcgcgctctccaaggagctgggc
ctgccgctgcccaaccacaagctggagtcgctggccgcgcacttcggtgtcgtacagcag
cgggcgcaccacgcgctggacgacgcgcgcgtgctggccgaggcgttccggccgagcctg
cgggccgccgcgcgggacggcatccggctgccgctcctggagtgccggccactcaaggag
tggtccgagagccccgcggcgccgcgcatcggacggcagtccggttccggcggttactcc
tccggcggttattcgtccggtggctatccgtccgggagttggcggccttcacgcaaacgc
cccgcatgcccctatcccaacccaggacgctatgaagcgggcaaaccgctcaagcagggt
atgcgggtcgcgttctccggggacacgtccgtcgaccgcgagctgctggaggaccgtgcc
gtcgaggccggcctgcatgtcgcgacgagcctgtcccggctgaccagcctgctggtcacc
aacgatccggactccagcacgtccaaggtggtcaaggccaaacagttcgggacaccggtg
atcgacgaggcggcgttcggccagctgctgcgggacgtggccccggcctcggagaagtga
DBGET
integrated database retrieval system
