Sphingosinicella microcystinivorans: SmB9_10070
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Entry
SmB9_10070 CDS
T05811
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
smic
Sphingosinicella microcystinivorans
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smic03009
]
SmB9_10070 (rimO)
Enzymes [BR:
smic01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SmB9_10070 (rimO)
Ribosome biogenesis [BR:
smic03009
]
Prokaryotic type
ribosomal protein modification factors
SmB9_10070 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RNase_II_C_S1
FAP42_B3
DUF5005
Motif
Other DBs
NCBI-ProteinID:
BBE33349
UniProt:
A0AAD1D4J7
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All DBs
Position
complement(1041753..1043132)
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AA seq
459 aa
AA seq
DB search
MSPPLHPGVFSVTGARLMTVKTLPAPPKVGMVSLGCPKALVDSERILTKLRSDGYAMSPD
YAGADVVLVNTCGFLDSAKEESLAAIGEAIAENGRVIVTGCMGNEADVIRARFPDVLAVT
GAHQYEAVVEAVHEAAPPVPSPFVDLVPEAGLKLTPRHYSYLKISEGCNHRCKFCIIPSL
RGDLVSRPAAAVVREAAKLVEAGTKELLVISQDTSAYGVDIRHATSKWEGREYRAHITDL
ARDLGKLGAWVRMHYIYPYPHVDQLMPLMAEGLVLPYLDIPFQHASPAVLRRMARPANEA
KVLERIRSWRQVVPDLAIRSTFIVGFPGETEEDFQYLLDWLEEAGIDRAGCFKYEAVEGA
AANALDGAVPEEVKDERWHRFMAAQARISAARLQSRIGREIDVIVDEADDEGGATGRSQW
DAPEIDGQVLLRDADVAPGDIVRVRIEDADETDLFGVPA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccccccttgcatcccggcgtgttttccgtcactggcgcgcgtctcatgaccgtg
aaaacgctccccgcgccgccgaaggtcggcatggtgtcgctcggctgcccaaaggcgctg
gtcgacagcgagcggattctgaccaagcttcgctcggacggttacgcgatgagcccggat
tatgcgggcgcggacgtcgtgctggtgaacacctgcgggttcctcgatagcgccaaggaa
gagagccttgccgcgatcggcgaggcgatcgccgagaacggccgcgtgatcgtgaccggg
tgcatggggaacgaggcggacgtgatccgcgcacgcttccccgatgtgctcgccgtgacg
ggcgcgcatcagtatgaggccgtcgtcgaggccgtgcacgaggccgcgccgccggtgccc
tcgccgttcgtcgatctggtgccggaggcggggctgaagctgacgccgcgccactattcg
tatctgaagatttccgaaggctgcaatcaccgctgcaagttctgcatcatcccctccctg
cgcggcgatctcgtcagccggccggcagcggcagtggtacgggaagccgcgaaactggtg
gaagcgggcacgaaggaactgctcgtcatcagccaggacacgtcggcctacggcgtcgat
atccgccacgcgacatcgaagtgggaagggcgcgagtatcgcgcgcacatcaccgatctg
gcgcgcgatctgggcaagctcggcgcgtgggtgcggatgcactacatctacccctatccg
cacgttgatcagctgatgccgctgatggccgaggggctcgtgctgccctatctcgatatc
cccttccagcacgcgagcccggcggtgctgcgccgtatggcgcggcccgcgaacgaggcg
aaggtgctggagcgcatccgctcgtggcgtcaggtcgtgcccgatctcgccatccgctcc
accttcatcgtcggtttccccggcgagacggaagaggatttccagtacctgctcgactgg
ctggaagaggcggggatcgatcgcgccggctgcttcaaatacgaagccgttgaaggtgcc
gccgcgaacgcgctggatggcgctgtccccgaagaggtgaaggacgagcgctggcaccgc
ttcatggcggcgcaggcccggatttcagccgcgcgcctgcaaagccgcatcggccgcgag
atcgacgtgatcgtcgacgaggccgacgacgaaggcggcgcgaccgggcgatcgcagtgg
gacgcgccggagatcgatggccaggtgctgctgcgcgacgccgatgtcgcgccgggcgac
atcgtgcgcgtgcgcatcgaggatgccgacgagacggacctgttcggcgttcccgcttaa
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