Sphingosinicella microcystinivorans: SmB9_11740
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Entry
SmB9_11740 CDS
T05811
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
smic
Sphingosinicella microcystinivorans
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smic02000
]
SmB9_11740
Transporters [BR:
smic02000
]
Other transporters
Pores ion channels [TC:
1
]
SmB9_11740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BBE33516
UniProt:
A0AAD1D4B8
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All DBs
Position
1218650..1220842
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AA seq
730 aa
AA seq
DB search
MATKWKWIAGLGVSGIAMAAAGQAMAQQAESGAQSGLVLEEIVVTADRQDSYSADFVQAG
SFRGARQIDTPLTVSVIPEQVLKSQQAQSILDALRNSPGVTSSQTSPTVYNNLSIRGIPV
ENRGNYRLNGSLPIVNLIDLPLENKVRVEALKGASALYYGFTTPSGIINLTTKRPTLDPV
FSVAVNGNDHGQVQGHIDAGGTWGILGVRGNLVYGTVDSGIDNTWGRRSFQSGAFQLTPS
DNLRINLDVEHISKEVTEPTVLQLTTATTALPRLTSASNNPGSKGFMNKADATNVLGRVA
WKFTPAWEIVAEGGISYLERDRRFSSLSAFDPVTGKGRLTMGAADGQLYRNKNGRIELAG
TFATGPVIHELLVGASKNIRRQYSPLSNASVGTNNPTTRANCVALGLASDCLQSAYDPID
LPDIRYDGTTPYNPARDTSIEDTGFYAFDRMRFGGPNDDLISVLVGARKSIYKEKRKNAV
GPSTETFSDKPLALSGGLVVKPQEWISAYATYIEGLESTPGAPLTANNAGEILPASNSKQ
YEGGIKVEPKKGLLFTAAYFDITRQLTYLNSANFFVQDGRATYRGLELSLTGEVTPDLSL
YGSALFLRAKQGETADTALIGNRIENTAKSQWSVSGEYRLTQLVEGLAINAGAYYTGARA
INPQNTLFVPGYTLFDLGGSYAFEIGGVGMTARVNAQNITGKKYFASTSSNYIAFGAPSV
IKFSLTANIF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaagtggaaatggatcgccgggctcggtgtcagcggaatcgcgatggcagca
gccggtcaggcgatggcgcagcaggccgaatccggagcgcagtcgggcctcgtgctcgag
gaaatcgtcgtcaccgccgaccgtcaggacagctatagcgcggatttcgtgcaggcgggc
agcttccgcggcgcgcgccagatcgatacgccgctcaccgtcagcgtcattcccgagcag
gtgctgaaatcgcagcaggcgcagagcattctcgatgcgctgcgcaactcgccgggcgtc
accagctcgcagacgagccccacggtttacaataacctctcgatccgcggcattccggtc
gagaaccgcggcaactaccgcctcaacggctcgctgccgatcgtgaacctcatcgacctg
ccgcttgaaaacaaggtacgcgtcgaagcgctgaagggcgcgtcggcgctctattacggc
ttcacgacgccgtccggcatcatcaatctcaccacgaagcgtccgacgctcgatccggtg
ttctccgtcgcggtgaacggcaacgatcacggccaggtgcagggccacatcgacgccggc
ggcacgtggggcatcctcggcgtgcgcggcaaccttgtttacggcacggtcgattctggc
atcgacaacacttggggccgccgcagcttccagtccggcgcgttccagctgacgccttcg
gacaatcttcgcatcaacctcgatgtcgagcatatctcgaaagaggtgacggagccgacc
gtgcttcagctcacgacggccacaacggcgcttccgcgcctgacgagtgcgtcgaacaat
cccggcagcaaaggtttcatgaacaaggcggacgcgaccaacgtcctcggccgtgtggcg
tggaagttcacgccggcatgggagatcgtcgccgagggcggaatttcatatctggaacgc
gatcgtcgtttcagctcgctgtcagccttcgaccctgtcaccggcaaggggcgcctgacc
atgggcgcggcggatggccagctttaccggaacaagaacgggcgcatcgaacttgccggc
acctttgcgaccggtcctgtcattcatgaactgctcgtgggcgcgtcgaaaaatatccgc
cgtcagtattcgccgttgtcgaatgcgagcgtaggcacgaacaatccgaccacgcgcgca
aactgtgtcgcactcggacttgcctcggactgtttgcagagcgcgtatgatccgatcgac
ctcccggatatccgctacgacggcacgacgccgtacaaccccgcacgcgatacctcgatc
gaggataccggcttctatgccttcgaccggatgcgtttcggcggacccaacgatgatctg
atcagcgtgctcgtcggtgcgcgcaagtcgatctacaaggagaagcggaagaacgccgtc
gggccgagcacggaaaccttttccgacaagccgctcgcgctgtcgggtggccttgtggta
aagccgcaagagtggatcagcgcctatgcgacctacatcgaaggccttgaatcgacgccg
ggcgcgccgctgacggcgaacaatgcgggcgagattctgccggcaagcaattcgaagcag
tacgaaggcggtatcaaggtcgaaccgaagaagggcctgctgttcacggcggcctacttc
gatatcacgcggcaactgacgtatctcaattccgcgaatttcttcgtgcaggatggcagg
gccacctatcgcggccttgaactcagcttgacgggtgaagttacgccggacctttcgctt
tacggatcggcattgttcctgcgcgccaagcagggtgaaacggcagacacggcgctaatc
ggcaatcgcatcgaaaacaccgcgaagtcgcagtggtcggtgtcgggcgaatatcgcctc
acgcagcttgtggaaggtctcgcgatcaatgcgggtgcctattacacgggagcgcgggcg
atcaatccgcagaacacgctgttcgttccgggttacacgctgtttgatctcggcggatcg
tatgccttcgagatcggcggcgtgggcatgaccgcgcgcgtcaatgcccagaacatcacg
ggcaagaagtatttcgcctccacgagcagcaactacatcgccttcggtgcgccgtcggtg
atcaagttctcgctcaccgcgaacatcttctaa
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