Sphingosinicella microcystinivorans: SmB9_12440
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Entry
SmB9_12440 CDS
T05811
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic00300
Lysine biosynthesis
smic00470
D-Amino acid metabolism
smic01100
Metabolic pathways
smic01110
Biosynthesis of secondary metabolites
smic01120
Microbial metabolism in diverse environments
smic01230
Biosynthesis of amino acids
Module
smic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SmB9_12440 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SmB9_12440 (dapF)
Enzymes [BR:
smic01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SmB9_12440 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
BBE33586
UniProt:
A0AAD1D689
LinkDB
All DBs
Position
complement(1284366..1285172)
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AA seq
268 aa
AA seq
DB search
MTRPFLKMHGLGNDFVVFDARVEPLSLTAQQVRAIADRHTGIGCDQLIVIERSDRADAWM
RIWNADGSEVEACGNASRCVAQVIGANALIETAGGLIEGTATAEGASIDMGTPRFGWDEI
PLAYAMDTLHMPVGWETLESPVAVNVGNPHVVFFVPDTDSVDLERLGPIIEHDPLFPARI
NVNVASIVSREHIRLRVWERGVGLTRACGTGACATAIAAMRRGLVDRDVTVTLPGGDLSI
AWRDDNHIVMTGPATTAFTGEIDLEAYA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtccgtttctcaagatgcacggcctcggcaacgacttcgtcgtgttcgatgcg
cgcgtggagccgctgtcgctgacggcgcagcaggtgcgcgccatcgccgaccggcatacg
gggatcggctgcgatcagctgatcgttatcgagcgatccgaccgcgccgacgcgtggatg
cggatctggaacgccgatgggagcgaggtcgaggcgtgcggcaacgcatcccgctgcgtg
gcgcaggtgatcggcgcgaatgccctgatcgagacggctggcggcctcatcgagggcacg
gcgacggcagaaggcgccagcatcgacatgggcacgccacgctttgggtgggatgagatc
ccgctcgcctacgcgatggacacgctgcacatgccggtcggctgggaaacgctggaaagc
ccggtcgcggtgaacgtgggcaacccgcacgtcgtgttcttcgtgcccgacactgattcg
gtggacctggagcggctggggccgatcatcgaacatgacccgctgttccccgcgcgcatc
aatgtgaacgttgcaagcatcgtctcgcgcgaacacatccgcctgcgggtgtgggaacgc
ggcgtcgggctgacgcgcgcctgcggcaccggggcgtgcgccaccgcgatcgcggcgatg
cggcgcggccttgttgatcgcgacgtgacggtgacgctgcccggcggcgacctttcgatc
gcatggcgggacgacaaccatatcgtcatgaccggcccggcgacgaccgctttcaccggc
gagatcgacctcgaggcctacgcttga
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