Sphingosinicella microcystinivorans: SmB9_12470
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Entry
SmB9_12470 CDS
T05811
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic02024
Quorum sensing
smic03060
Protein export
smic03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SmB9_12470 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SmB9_12470 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SmB9_12470 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smic02044
]
SmB9_12470 (ffh)
Enzymes [BR:
smic01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SmB9_12470 (ffh)
Secretion system [BR:
smic02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SmB9_12470 (ffh)
Eukaryotic Sec-SRP protein
SmB9_12470 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_33
ArsA_ATPase
ABC_tran
cobW
ResIII
Thymidylate_kin
AAA_31
AAA_19
DnaB_C
YqeC
AAA_14
AAA_16
APS_kinase
NB-ARC
AAA
NACHT
GTP_EFTU
AAA_5
KTI12
6PF2K
ATPase_2
NPHP3_N
DUF87
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BBE33589
UniProt:
A0AAD1D513
LinkDB
All DBs
Position
1286886..1288316
Genome browser
AA seq
476 aa
AA seq
DB search
MFESLSERLGGVFDRLRGRGALTEADVRAAMREVRVALLEADVALPVAKSFIDKVTERAI
GAEVTRSVTPGQQVVKIVHDELAMMLGGDAEGLELDVTPPAIIMMVGLQGSGKTTTTAKI
AKRLKEKDRKKVLMASLDVNRPAAQEQLRVLGEQTEVATLPVIAGQQPVDIARRALQAAK
LQGFDVLMLDTAGRLHVDAALMAEMQSVAAVAVPQEILLVVDSLTGQDAVNVAENFSKQV
DLTGVVLTRMDGDARGGAALSMRHVTGKPIKFVGVGEKLDALDAFDPQRVAGRILGMGDV
VSLVEKAAATIEQEDAERMAAKLAKGQFDMNDLRSQLQQMQKMGGMAGLIGMLPGMGKLA
AQAEKAGADDKLLGRMEAVILSMTPKERGKPEILNAKRKIRIANGAGTTVQEVNKLLKMH
QEMSTAMKKIRKMGGMKGLAGLMGKMGGGIPGLGGLGGLGGGGMPQLPPGFDKFKR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaagtctttcagagcgtcttggcggtgtcttcgatcgtcttcgcggtcgcggt
gcgctgaccgaggcggacgtgcgcgcagcgatgcgcgaggtccgcgtcgcgcttctggaa
gccgacgttgcgctgcccgttgccaagagcttcatcgacaaggtcactgagcgcgccatt
ggcgccgaggtcacccgttcggtcacgcccggccagcaggtcgtcaagatcgtccacgac
gagctcgcgatgatgctcggcggcgacgccgaagggctcgaactggatgtcacgccgccc
gccatcatcatgatggtcggcctccagggttcgggcaagacgacgacgaccgcgaagatc
gcgaagcgtctgaaggaaaaggaccgcaagaaggtcctgatggcctcgctcgacgtcaat
cgcccggccgcgcaggaacagctccgcgtgcttggcgagcagaccgaggtggcgacgctg
ccggtgatcgcagggcagcagccggtcgatatcgcccgccgcgcacttcaggccgcgaag
ctgcagggcttcgacgtgctgatgctcgacacggcgggtcgcctgcacgtcgatgcggcg
ctgatggcggaaatgcagagcgttgccgccgtggcggttccgcaggaaatcctgctggtg
gtcgactcgctgacgggtcaggacgccgtgaacgtcgccgagaatttctcgaaacaggtt
gatctcaccggcgtcgtgctgacccgcatggatggcgacgcgcgcggcggtgcggcgctt
tcgatgcggcacgtcaccggcaagccgatcaagttcgtcggcgtcggcgaaaagctcgat
gcgctcgatgcgttcgatccgcagcgtgtcgcgggccgtatcctgggcatgggcgacgtc
gtcagccttgtcgagaaggcggcggcgacgatcgagcaggaagacgccgagcgcatggcg
gcgaagctcgccaagggtcagttcgacatgaacgacctgcgctcgcagcttcagcagatg
cagaagatgggcggcatggcgggcctgatcgggatgctgcccggcatgggcaagctcgcc
gcgcaggccgagaaggcgggcgccgacgacaagctgctcggccggatggaggcggtgatc
ctctccatgacgccgaaggagcgcggcaagcccgagattttgaacgcgaagcgcaagatc
cgcatcgcgaacggcgcggggacgacggtgcaggaggtgaacaagctcctgaagatgcac
caggaaatgtccaccgcgatgaagaagatccggaagatgggcggcatgaaggggctcgcc
ggtctcatggggaaaatgggcgggggcattcccggccttggtggtctcggaggattgggc
ggaggcgggatgccgcagctgccgcccggcttcgacaagttcaagcgttag
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