Sphingosinicella microcystinivorans: SmB9_12750
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Entry
SmB9_12750 CDS
T05811
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
smic
Sphingosinicella microcystinivorans
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smic03400
]
SmB9_12750
Enzymes [BR:
smic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SmB9_12750
DNA repair and recombination proteins [BR:
smic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SmB9_12750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
BBE33617
UniProt:
A0AAD1D586
LinkDB
All DBs
Position
1314687..1317584
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AA seq
965 aa
AA seq
DB search
MAERTSVFTIPAHRAFADALAAGMLSRIGRAELPRALLLLPNRRAVRAVTEAFVRASGGA
LLLPRMLPIGDVGENEALGLFDEAMTLEADVQPAIAAFERRMLLMPLVRRWQQLNGRARS
SVETLRLADALAHTLDQLQLEGIEPARLHETMAELGAHWEATLKFVEVVVAGWPPQLAAR
GLMDRVARRQALLAAIADRWRAHPPTRPIVAAGMASADPAVAAVLAVVAGLPRGAVVLPG
LDLDTRDWDAIRAFPAHPQCGLWHLLDRMSVARDEVRVWEGTSERDGSEERAEAIGAALS
LAGSTAHWPPAGPLPGLRFAEAANPAEEAGVIALAMRRQLDTPGATAALVTPDRGLARRV
AAQLRRWEVEVDDSAGTPLARAPSGTLLLAALEAGAQRFAPGALLALLKHPLTGPGEGRA
RLNWLDEVRRLDLVLRGVRPAAGLKGIAARVTSPPQGALPEGERTQLAAWWKALRPRLDA
LETLMAKPQALSAFAEGLRVFAEDISEGRVWEGAAGRAASETIAEIVQHGEIGLPIPPMD
LPALLGAMLEDVAVRPPFGKHPRLAIYGLLEARLQRTDLMILGGLNEGAWPGGDPFDPWI
PPAIRRRLGLPETERAIGLAAHDFVLAAAAPEVLLTRARRDASAPTVASRFWLRLLAFAA
EHAAWDTELPALAAALDARETVPPAERPRPSPPVADRPTQISVTQVDRLLIDPYSFYAEK
MLRLRPLDPLDADLSAAERGTIVHAVIEALIEAGTLNNPAAREAAIDIALAEHADQPLVA
ALWKPRIVRMLDWVSELMAARADAGWGEVRSEVEGHFEVSGVKLKGKADIVQAGPQGLLI
ADFKTGAVPRQARLSDGLASQLGLLAWLAEEGALDGPASRVVEVAYWKLSGGKEAGKETT
SARHYKGAWADLPAFIETCRKAFQEAVAEYLAGSRPFEAKVKPEYAVHLQDYDHLARLAE
WWGRK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcggacatccgttttcacaattccggcgcaccgtgccttcgccgacgcgctc
gccgccgggatgctgagccgtatcgggcgtgccgaactgccccgggcgctgttgctgctt
cccaatcgccgcgctgttcgcgccgtgacggaggcgtttgtgcgcgcttcgggtggcgcg
ctgttgctgccccggatgctgccgatcggcgacgtcggcgagaacgaggcgcttggcctt
ttcgacgaagcgatgacgctggaggcagacgtgcagccggcgattgccgcgttcgagcgg
cgaatgctgctgatgccgcttgtccgccgctggcagcaactgaatggccgcgcccgcagc
agtgtcgagacgctgcggctcgccgatgcgctggcgcacacgctcgatcagcttcagctc
gaaggcatcgaacccgcgcgtcttcacgaaacgatggcggagcttggcgcgcactgggaa
gcgacattgaagttcgtggaggtcgtggtggctgggtggccgccgcagcttgccgcgcgc
gggcttatggaccgcgtggcccggcggcaggcacttctggccgcgatcgctgatcgctgg
cgggcccatcctcccacgcggccgatcgtggcggcgggtatggcaagcgccgacccggcg
gttgcggcggtgctcgcggtggttgccggtctgccgcggggagcggtggtgctgcccggt
ctcgatctcgataccagggattgggacgcgatccgcgcgtttccggcgcatccccagtgc
ggcctctggcaccttctggaccggatgagcgtcgcgcgcgacgaggtgcgcgtttgggag
ggcaccagcgagcgcgatgggtccgaagagcgtgcggaggcgatcggcgcggcgctctcg
ctcgcgggaagcacggcgcactggccgcccgcgggcccgctccccgggcttcgtttcgcg
gaggcggcgaacccggccgaggaggctggcgtcatcgcgctcgccatgcgccgccaactg
gacacgccgggggcgactgccgcgcttgttacgccggatcgcggccttgcccgccgcgtc
gccgcgcagcttcggcgctgggaggtcgaggtcgatgattcggcgggcaccccgcttgcg
cgcgcgccttcgggcacgctgctgcttgcggcgctggaggctggtgcgcagcgtttcgcg
ccgggcgcgctgctcgcgctcctgaagcatccgctgaccgggccgggtgagggcagggca
cgcctgaactggctcgacgaggtgcgccgcctcgatctcgtgctgcgcggcgtgcggccc
gcggcggggctgaaaggcattgccgcgcgcgtcacatctccaccgcagggtgcgcttccc
gagggcgagcgcacacagcttgccgcttggtggaaggcgcttcgccctcggctcgatgcg
ctggaaacgctgatggcgaaaccgcaggcgctttcggcgttcgcggaggggcttcgtgtc
ttcgccgaagacatctccgaaggtcgcgtctgggaaggcgccgctgggcgcgcggcgtct
gaaacgatcgcggagatcgtgcagcacggcgagatcggcttgcccattccgccgatggat
ctccccgcgctgctgggcgcgatgctggaggacgtcgcggtgcgcccgccgttcggcaag
catccgcgcctcgccatctacggtcttctcgaagcacgattgcagcgcacggatctgatg
atcctcggcgggctgaacgaaggtgcctggccgggcggcgacccgttcgatccatggatt
ccgcccgcgatccgccgccgactcggcctgcccgagaccgagcgcgcgatcggccttgcc
gcgcacgatttcgtgctcgccgctgctgcgcccgaagtgctgctcacacgcgcgcggcgc
gatgcctccgcgcccacggttgcgtcgcgcttctggctgcggctgcttgcctttgcggca
gaacatgccgcttgggataccgaactccccgcgcttgctgccgccctcgacgcgcgggaa
accgtgccgcccgccgagaggccgcgtccctctccaccggttgccgacaggccgacgcag
atcagcgtgacgcaggtcgatcgcctgctgatcgatccctacagcttctacgccgaaaag
atgctgcgcctgcgaccgctcgatccgctcgacgccgatctctcggcggctgagcgcggc
accattgtccatgctgttatcgaggcattgatcgaggcgggtacgctcaacaatcccgcc
gcgcgcgaagcagccatcgacatcgctcttgccgagcacgccgaccaaccgctggtcgcg
gcgttgtggaagccgcgcatcgtgcggatgctcgattgggtttcggaactgatggccgca
cgggcggatgcgggttggggcgaggtccgctccgaagtcgaggggcacttcgaggtttcc
ggcgtcaagctcaagggcaaggcggacatcgttcaggcagggccgcagggcttgctgatc
gccgacttcaagaccggcgccgtgccccggcaggcgcggctttcggatgggctggcctct
cagcttggcctccttgcgtggcttgccgaggaaggcgcgctcgatggcccggcgtcgcgc
gtcgtcgaggtcgcctactggaaactgtcgggtggcaaggaggcgggcaaggaaacgacg
agcgcgcgccactacaagggcgcatgggctgatctccccgcgttcatcgagacctgccgc
aaggcgttccaggaggcggtcgccgaatatctcgcgggcagtcggcccttcgaggcgaag
gtgaagccggaatacgccgtccacttgcaggactacgaccacctcgcgcggcttgccgaa
tggtggggtcgcaaatga
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