Sphingosinicella microcystinivorans: SmB9_12760
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Entry
SmB9_12760 CDS
T05811
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
smic
Sphingosinicella microcystinivorans
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smic03400
]
SmB9_12760
Enzymes [BR:
smic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SmB9_12760
DNA repair and recombination proteins [BR:
smic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SmB9_12760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BBE33618
UniProt:
A0AAD1D570
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All DBs
Position
1317581..1320904
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AA seq
1107 aa
AA seq
DB search
MSIRPLLPEQKRAADPELSAWVSASAGTGKTQVLTARVLRLLLAGARPDGLLALTFTKAA
AAEMQTRIFETLSRWVRADEGALTAELVAIGAPSDEDTRRRARALFAEALETRGGLKVQT
LHSFASALLAAFPLEAGIAPGYETLDDRSALRIHSETLAERIGSGDASLLADLADLSVQG
GEARVQEVIAKLLAGRAVFENVYGKAVDWRGLVRRGLGLPVSGSRDEVLSDALADDAFDW
ETVREYTAAMVAWGTKTGLEAADTLGRVLGAAPEVRHDFLDDLVGIAFTAAGEFKKPPRK
NDPYFDTLHARFCMVIGAVRDLAAGLDLAETAALHLRVGHAFAAAYETRKEAAGALDYAD
LIVKAARLLSTLAAPFVLFKLDQRIDHILVDEGQDTNAAQWAIVEAIADEFFAGTGTRDE
AETGARTQFAVGDYKQAIFGFQGTDPRAFEAARVAAERRALGAEKPFETIDLALSFRSVP
AVLDVVDTVVEAVGAAAFGIEGDIPRHAAHRAGAAGEVVLWAPVTGEPDDDDEVEDAVPE
DAERTLAANIARQVAGWLERGELLASKGRPIAAGDIMLLVRSRGSLVPALVSALMAARVP
VAGADRLRLTQPLAVQDLLALVRFALQPGDDLSLAALLVSPFLGWSQDDLYDLAFKRRGT
LWRTLRDRSDDKARAAEDWLGKVLARADYMAPYEFLEYVLSGEPQGRLRLIARLGEEARD
PIEELLNQALAYEGANTPSLQGFLSWIEADDVEVKRDAEAAHDAVRIMTVHGSKGLQAPI
VIMADAASAVPKGAKPPLPLELPGLGPAPLFFGSSKTLVGPAREAYEAATRAEGEEHMRL
LYVALTRAEDRLYVGGALGKRPSKAKSWHGHVTDALAALGAQSVADSVWGDVLRHASGTP
APVAAPTKPVRRTTPAIPAWALAMPPEEERPPRPLAPSAPQDDDPAEPPPGPALRAAARR
GQVLHQLFERIGGVAPENRAAAVHAWLRRNAPDLDAGAIAAEVVGALADPTLTAWFAEGA
YAEAPLSAVVEDVVITGTIDRLIVEEGVVRALDFKTGRNPPQDLSGVPTPHLRQMRAYRD
ALARIFPGHRIETALFYTAALRFIRVD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccggccccttcttcccgaacagaaacgcgctgccgaccctgaactcagcgca
tgggtttcggcctctgcgggcacggggaaaacgcaggtcttgaccgcgcgcgtgctgcgg
ctgctgcttgcgggcgcgcggccagacgggctgctcgcgctcaccttcaccaaggcggcg
gcggcggagatgcagacgcgcatcttcgaaaccctgtcgcgctgggtgcgtgcggacgag
ggggcgcttaccgccgagctcgtcgcgatcggtgcgccgtccgacgaggacacacgtcgc
cgcgcacgcgcgctgttcgcggaggcactggagacgcgcgggggcctgaaggtgcagacg
ctgcacagcttcgcgagcgcgctgctcgccgccttcccgctcgaagccgggatcgcgccc
ggctacgaaacgctggacgaccggagtgcgctgcgcatccattccgaaacgcttgccgaa
cggatcggcagcggcgacgcatcgctgctcgccgaccttgccgatctctccgtgcaaggc
ggtgaagcgcgcgtgcaggaggtgatcgcgaagctgctcgctgggcgcgcggtgttcgaa
aacgtctacggcaaggcggtcgactggcgcggcctcgtgcggcgcgggcttggccttccg
gtcagcggcagccgagatgaagtgctttccgacgcgctcgccgacgatgccttcgattgg
gaaaccgtgcgcgaatatacggcggcgatggtggcatggggcacgaagacgggtctcgag
gcggccgatacgctgggacgtgtgctcggcgcggcgcctgaagtgcgccacgactttctg
gacgatctcgtcgggatcgcgttcaccgcggcgggcgagttcaagaaaccgcccaggaag
aacgatccgtatttcgacacgctccacgcgcgcttctgcatggtcatcggcgcggtgcga
gaccttgccgccgggctcgaccttgccgaaacggcggcgcttcacctgcgtgtcggccac
gcgtttgcggcggcatacgagacgcgcaaggaagcggcgggagcgctcgattatgccgac
ctcatcgtcaaggccgcgcggctgctctccacgctcgccgcgccgttcgtgctcttcaag
ctcgaccagcgcatcgatcacatcctcgtcgacgaggggcaggatacgaacgccgcgcag
tgggcgatcgtggaggcgatcgccgacgagttcttcgcaggaacgggcacgcgcgacgag
gcggagacgggcgcgcgcacgcagttcgcggtgggcgactacaagcaggcgatcttcggt
ttccagggcaccgacccgcgcgcgttcgaagcggcgcgggttgccgccgaacgccgggcg
ctcggtgcggagaagcccttcgagacgatcgacctcgcgctcagcttccgctccgtgccg
gccgtgctcgatgtcgtcgatacggtggtggaagccgtcggtgccgcagcattcggcatc
gaaggcgatattccgcgccacgctgcgcatcgtgccggtgcagccggcgaagtcgtgctc
tgggcgcccgtcacgggcgagccggatgatgacgacgaggtggaagacgccgtccccgag
gatgccgagcgcaccctcgcggccaatatcgcgcggcaggttgcgggctggctggaacgc
ggcgaattgctcgcctccaagggcaggccgatcgcggcgggagacatcatgctgctggtg
cgctcgcgcggcagccttgttcccgcgcttgtctctgcgctgatggcggcgcgcgtgccg
gtggcgggtgcggaccggctgcgcctcacgcagccgctcgcggtgcaggatttgctcgcg
ctcgtccgtttcgcgctccagccgggcgacgatctctcgctcgccgcgctgctcgtgtcg
ccgttcctcggttggtctcaggatgacctgtatgacctcgcgttcaagcgtcgcggcacg
ctctggcgcacgctccgggaccgcagcgacgacaaggcccgcgccgccgaggattggctc
ggcaaggtgctcgcccgcgccgactacatggcgccgtacgagttccttgaatacgtgctt
tcgggcgaaccccagggccgccttcgcctgatcgcgcggctcggcgaggaagcgcgcgac
ccgatcgaggaactgctcaatcaggcgcttgcatacgagggcgcgaacacaccctcgcta
caaggcttcctgtcgtggatcgaggcggacgacgttgaggtgaagcgcgatgccgaggcc
gcgcacgacgctgtccgcatcatgacggtgcacggttcgaaggggttgcaggcccccatc
gtcatcatggccgatgcagcgtccgccgtgcccaagggcgcaaagccgccgctgccgctt
gagctgccgggccttggacccgccccgctgttcttcggctcgtcgaagacgctcgtcggc
cccgcgcgcgaggcttatgaggccgcgacccgggcggagggcgaggagcatatgcgcctg
ctctatgtcgcgctgacccgcgccgaggatcgcctctatgtcggcggcgcgctcggcaag
cgtccatcgaaggcgaaaagctggcacggtcacgtcactgatgcgctcgccgcgctcggc
gcgcaaagcgttgccgattccgtctggggcgacgtgctgcgccatgcgagcggcacgcct
gcaccggtcgcagcgccgacgaaacctgtgcggcgcaccacgccagccattcccgcgtgg
gcgctcgcaatgccgccggaggaggagcgcccgccgcgcccgctcgcgccgtccgcgccg
caggatgatgatccagccgagccgccgcccggcccggcgctgcgtgctgccgcgcggcgc
gggcaggtgctgcaccagctgttcgaacggatcggcggtgttgctcctgaaaaccgcgcg
gcggcggtgcatgcatggcttcgccgcaacgcgcctgatctggacgcaggtgcgattgcc
gccgaggttgtgggcgcgctcgctgatcccacgctcaccgcgtggtttgcggagggagcc
tatgccgaagcgccgctttccgccgtcgtcgaggatgtcgtcatcaccggcacgatcgac
cggctgatcgtcgaggaaggcgttgtgcgcgcactcgatttcaagaccgggcggaacccg
ccgcaggacctttccggcgtgccgactccgcacctgcgccagatgcgcgcctaccgcgat
gcgcttgcccgtatcttcccgggccaccgcatcgagacggcgttgttctacacggcggcg
ctgcgtttcatccgcgtggattga
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