Sphingosinicella microcystinivorans: SmB9_14150
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Entry
SmB9_14150 CDS
T05811
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smic
Sphingosinicella microcystinivorans
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smic03016
]
SmB9_14150 (truB)
Enzymes [BR:
smic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SmB9_14150 (truB)
Transfer RNA biogenesis [BR:
smic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SmB9_14150 (truB)
Prokaryotic type
SmB9_14150 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBE33757
UniProt:
A0AAD1D4M7
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All DBs
Position
1445890..1446771
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AA seq
293 aa
AA seq
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MDGWIILDKPLGLTSAQGVAAIKRLWRQAGFPRPKIGHGGTLDPLATGVLPIALGEATKL
TGRMLNGDKAYDFTVRFGVATETEDAEGAVVATSDVRPSRSEIEAVLPRFTGPIEQRPPA
YSALKVDGERAYARARAGETVVLALRGVTIHALDLLEANGETATFSVACSKGTYVRSLAR
DIAKALGTVGHVVMLRRTKAGPFGLESAITLDKLGELAMEQRLIAALLPLTAGLDDIPAL
AVNPGEAARLKSGQTLAGRPEPDGLVVAMLDAVPVALARVEAGTVRVERGFNL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtggacggctggatcattctcgacaagccgctggggctcacctcggcgcagggcgttgcc
gcgataaagcggctgtggcggcaggcgggctttccgcggccgaagatcggccatggcggt
acgctcgatccgctcgcgacaggcgtgctaccgatcgcgcttggtgaggcgaccaagctc
acgggccggatgctgaacggcgacaaggcctacgatttcacggtccgcttcggcgtcgcg
acagaaacagaggatgccgagggcgccgtggtggcgacatcggacgtgcggccctcgcgg
tcggagatagaggcggtgctgccgcgcttcaccgggccgatcgagcagcgcccgcccgcc
tattccgcgctgaaggtggatggcgagcgggcctatgcgcgggcgcgggccggggagacc
gtggtgctggcgctgcgcggcgtgacgatccatgcgctcgatctgctggaggccaacggc
gagacggcgacgttctccgttgcgtgttcaaagggcacttacgtgcggagccttgcgcgc
gacattgcgaaggcgctgggcacggttgggcacgtggttatgcttaggcgcacgaaggcg
gggccgttcggcctcgaaagcgcgataacgctggacaaactcggcgaactcgctatggag
cagcgccttatagcggcactgttgccgctgaccgcggggctggacgacatcccggctctg
gcggtcaaccccggcgaagcggcccggctcaaatcgggccagacgctcgccggacgtccc
gaaccggacggacttgtggtcgcgatgctggacgcagtgcccgtcgcgctcgcccgcgtt
gaagcggggacagtccgtgtggagcggggcttcaacctctag
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