KEGG   Sphingosinicella microcystinivorans: SmB9_14690
Entry
SmB9_14690        CDS       T05811                                 
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
  KO
K05788  integration host factor subunit beta
Organism
smic  Sphingosinicella microcystinivorans
Brite
KEGG Orthology (KO) [BR:smic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smic03032]
    SmB9_14690 (ihfB)
   03036 Chromosome and associated proteins [BR:smic03036]
    SmB9_14690 (ihfB)
   03400 DNA repair and recombination proteins [BR:smic03400]
    SmB9_14690 (ihfB)
DNA replication proteins [BR:smic03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SmB9_14690 (ihfB)
Chromosome and associated proteins [BR:smic03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    SmB9_14690 (ihfB)
DNA repair and recombination proteins [BR:smic03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      SmB9_14690 (ihfB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: BBE33811
LinkDB
Position
1501472..1501714
AA seq 80 aa
MNPHLSQRDVERVVSTIFDSITEALAHGRRVELRGFGAFSTRGRDPRTGRNPRTGEKVAV
DAKRVPYFKAGKELRERLNK
NT seq 243 nt   +upstreamnt  +downstreamnt
atgaacccgcatttatcgcagcgggacgtcgaacgggtcgtgtcgaccattttcgattcg
attacggaggcgctggcccacggtcgacgcgtggaactgcgcggcttcggtgccttttca
acgcgcggacgcgatccgcggacggggcgcaatccgcgcaccggcgaaaaggtggcggtg
gacgcgaagcgcgtgccgtatttcaaggccggcaaggaactgcgcgagcgccttaacaaa
tag

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