Sphingosinicella microcystinivorans: SmB9_23220
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Entry
SmB9_23220 CDS
T05811
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SmB9_23220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smic03019
]
SmB9_23220
Enzymes [BR:
smic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SmB9_23220
Messenger RNA biogenesis [BR:
smic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SmB9_23220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
PASTA
Motif
Other DBs
NCBI-ProteinID:
BBE34664
UniProt:
A0AAD1G1F0
LinkDB
All DBs
Position
2454923..2456113
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AA seq
396 aa
AA seq
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MKLPPQAWAETPGGSTVLRALDAENGTTRLVGGAVRDALLALPVTDVDLATALSPQEVTQ
RLEAAGVQVVPTGIAHGTVTAVTPDLIMEVTTLRRDVSTDGRRATVKYTADWREDAARRD
FTINALYARLPDGEIDDWFGGLDDLEAGRVRFIGEPLQRIAEDHLRILRFFRFHSRFGRG
EPDAAGLAACAARANDLMALSRERIREELFRILVLPRAAETIGLMLSLGVLKPVLPEIVE
ERVENLAALAAREAAWGAEPDAVRRFAALLPQRAGLGTAFGARLRLSRRDTARLDALGLP
DPALPGDPYSAAYFSGAETARDRLLLLGDEGHAAWTALEGWERPAMPVSGKDIIARGVTP
GPEVSRRLQRFERDWVASGCPLDALRIDALLDAALS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgccgcaggcatgggcggaaacgccggggggtagcaccgtgctgcgcgcg
ctcgacgccgaaaacggcacgacgcggctggtgggcggtgcggtgcgcgatgcgctgctt
gcgctgccggtgacggacgtcgatctcgcgaccgcgctttcgccccaggaggtgacgcag
cggctggaggcagcgggcgtgcaggtggtgccgaccggcatcgcgcacggcacggtgaca
gccgtgacccccgacctcatcatggaggtcacgaccctgcgccgcgacgtttccaccgac
gggcgccgcgcgaccgtaaagtatacagctgactggcgtgaagacgctgcgcggcgcgat
ttcacgatcaacgcgctctatgcccggctgccggacggtgaaatagacgactggttcggc
ggtctagacgacctcgaagctgggcgggtgcgcttcatcggggagcctttgcagcgtatc
gcggaagatcacctgcgcatcctgcgcttcttccgctttcacagccgcttcgggcgcggg
gagccggatgcggcagggcttgccgcctgcgcggcgcgcgcgaacgatttgatggcgcta
tcccgcgaacgcattcgcgaggagctatttcgtatacttgtgctcccgcgcgcggcggag
acgatcgggctcatgctgtcgctcggcgttctgaagccggtgctgccggaaatcgtggaa
gagcgggttgagaacctggcggcactcgcggcgcgggaggcggcatggggtgctgagcct
gatgcggtccggcgctttgccgcgttgttgccgcagcgtgcaggactgggcaccgcgttc
ggcgcgcggcttcggctgtcgcggcgcgatacggcgcggctcgatgcgcttggtcttccc
gacccggcactgccgggtgatccgtactcggccgcctatttcagcggcgcagagacagcg
cgcgaccgcctgctgctgctcggcgatgaggggcacgcggcgtggacggcactggagggc
tgggaacgtccggcaatgccggtgagcggcaaggatatcatcgcccgcggcgtgacgccc
ggcccggaggtgagccgccgtcttcagcgtttcgaacgcgactgggtggcgtcaggatgc
ccgctcgatgctttgcgcatcgatgctctgctcgacgccgctctctcctga
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