Sphingosinicella microcystinivorans: SmB9_23840
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Entry
SmB9_23840 CDS
T05811
Name
(GenBank) translocation/assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
smic
Sphingosinicella microcystinivorans
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smic02000
]
SmB9_23840
Transporters [BR:
smic02000
]
Other transporters
Pores ion channels [TC:
1
]
SmB9_23840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
BBE34726
UniProt:
A0AAD1D8D5
LinkDB
All DBs
Position
complement(2525327..2529541)
Genome browser
AA seq
1404 aa
AA seq
DB search
MEGRDGIIEEIEDEVLSRPFWTYAMRGFLWLLAIVVGLALLIAAALTVLDTDRGRVWLVA
RVMGLTPESGLRIGIDRIDGSLYGAAVVHGLTLSDPAGPFLEAPRVELDWRPQAVFSRRL
HIVKLVVPEARLLKVPKLIPSKEEKPLLPDYDIYVGGFEIGNLTLEPPVLGKRHQLSAEG
GADIASGRLLAALRANSRTGGDALVARVDARPDDKVFDIEGKLLAPAGGVVGGILGLDQP
LVATIEGEGSWQKWRGTAVGTLGDAPLMDLALSADEGRFALKGTASPGLAIGGIVRKFGS
PSIEVDAAAIIAERVIDGRASIVSPSVGLELDGAVDLAESRFRTVSVGASVRQPKALIST
MTADDMRLAMTLDGPFARPLIDYRLSANWLAIGTTRLDRVEVTGKGELPKEKLAVPIEAR
ALRITGLGELIEDLATNPRITGVIALDGPYITGKGLKVSSDRVTAVADLNIETRTGRYSV
IADGAVPRYVIPGLGMADIKAKLLFEPDARAGNRLRISGKADAAMKRLDNGLLSFLFQGN
PRAVANIVRTPDGLVTFTNAVLTSPDMRVTGRGTYAMDQRIRFTGNAVSERYGPMDVELG
GLVTRPEARIRVKSYAAGIELRDIRATFTPQGENYAFTALADTIAGPARAHGRILTGTPQ
TVYDIEAAEIAGLTATGPLRAVEGAPAVSGVLDVRGAGISGKIRLSPEGGVQRIDANLGA
RAARLDFGGGTTIRRGWVDGNIVLREAGAEISGRFDIEGLKQSALLLKTLKGTLEMQAGE
GTAALIATGERGAPFTFDLAASFDPESIIVTSQGTIARQKFALAAPARLDRTEDGWHLAS
VVLNLPSGTAKISGTFGETVSLTTDLNAAGLGLLQLALPGMNFTGTASGRIDMIFPSGAL
PRGTAKLRVTDFTRATEAFSKPVDLAVVAQLEANKAVMRAAFLDNGQRLGILQGRLLSIP
GSIDDPWLDRLMKAPISGQLRWRGPAEMLWPLTGVGALSVRGNIAVALEINGELGDPSLT
GIVRSRASRIESAITGTVVDNIRLAGRFTGSRLELTEFSGTAGTGSISGSGGIDLSFARG
FPIEIAMVMKSALILNRDDLRATASGPLRISNSPEGAIISGNVNIDRARFNIGQTAQVEV
PTLRVREKNTELLRADPLVAEGTAEPTVWQLDVKARGNNEIMVRGMGLDSEWSANLDIKG
SATAPRIGGVAELVRGDYEFAGKTFRLTRGELRFTGTYPPDPVVDIAAEARVEGLTATIT
IRGTGQRPEIAFSSIPALPQDEVLSRVLFGTSISNLSAPEALQLAGAVASLQGGGGGINP
INAVRRAVGLDRLRIMEANQLTGQKTAVAAGEYITDRVYVEVATDAQGYTATQLEIELTR
ALSILSSVATLGGTSVNLRWSKDY
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcgcgacggcatcatcgaagagatcgaggacgaggtgctgagccgcccgttc
tggacctatgcgatgcgtgggttcctctggcttctcgccatcgtcgtcggcctcgcgctg
ctgatcgccgccgcgcttaccgtgctcgatacggatcgcggccgcgtctggcttgtcgcg
cgtgtcatgggccttacgcccgagtccggcctgcgcatcggcatcgaccggatcgacggc
tcgctctacggcgctgccgttgtccacggtctcaccttgtcggaccccgcaggccctttc
ctcgaagcgccccgcgtcgagcttgattggcggccgcaggccgtgttcagccgccggctc
catatcgtgaagctcgtcgtgccggaggcgcggctgctcaaggtgccgaagctgatcccg
agcaaggaggagaagccgctccttccggactacgacatctatgtcgggggcttcgaaatc
ggcaacctgacgctcgaaccccctgtgctcggtaagcgccaccagctttcggcagagggc
ggcgccgacatcgcgagcggccgtctgctcgccgcgctgcgtgccaactcgcgcaccggc
ggcgacgcgctcgtcgcccgggtcgatgcccggcccgacgacaaggtgttcgacatcgaa
ggcaagctgctcgctccggcaggcggcgttgtcggcggcatcctcggcctcgatcagccg
ctcgtcgccacgatcgaaggcgaaggcagctggcaaaagtggcgcggcacggccgtcggc
acgctcggcgacgccccgctcatggacctcgcgctcagcgccgatgagggccgcttcgcg
ctcaagggcaccgcctctcccggcctcgccatcggcgggatcgtccgcaagttcggctct
ccgtcgatcgaggtggatgccgccgcgataattgccgagcgcgtcatcgatggccgcgcc
tcgatcgtctcgccgtcggtggggctagagctcgacggcgcggtagacctcgcggaatcc
cgcttccgaacggtctccgtcggcgcgtctgtgcgccagccgaaggccctgatatcgacg
atgacggcggacgacatgcgccttgccatgacgctcgacggccccttcgcgcgcccgctc
atcgattatcgcctgtccgccaactggctcgccatcggcacgacgcggctcgaccgtgtc
gaggtcacgggcaagggcgagcttccgaaggaaaagcttgccgttccgatcgaggcgcgt
gcgcttcgcattaccgggctcggcgagcttatcgaggatctggccaccaatccgcgcatc
accggcgtcatcgcgctcgatggcccctatatcaccggcaagggcctcaaggtgtcgagc
gaccgtgtcactgccgtcgccgacctcaacatcgaaacgcgcacgggccgctacagcgtg
atcgcggacggcgcggtgccgcgctacgtcatccccggtctcggcatggccgacatcaag
gcaaagctgctgttcgaacccgatgcgcgtgccggcaaccgactgcggatcagcggcaag
gccgatgccgcaatgaagcggctcgacaacggcctgctcagcttcctcttccagggcaac
ccgcgtgccgtcgccaacatcgttcgcacgcctgacgggctcgtcactttcacgaatgcc
gtgctcacctcgcccgacatgcgcgtcaccggccgcggcacctatgcgatggatcagcgc
atccgcttcaccggcaatgccgtttcagagcgctacggaccgatggacgtggaactcggc
ggcctcgtgacgcgccccgaagcacggattcgtgtcaagagctacgcggcaggcatcgag
cttcgcgatatccgcgccaccttcacgccgcagggtgagaattacgccttcacggcgctt
gccgatacgatcgcagggcccgcgcgggcgcacggccgtatcctgaccggcacgccgcag
accgtttacgacatcgaggctgcggagatcgccgggctcacggccacgggaccgctccgc
gcggttgaaggcgccccggcggtttcaggtgtgctcgatgtgcgcggggctggtatctcc
gggaaaatccgcctgtcgcccgaaggcggcgtgcagcgcattgacgccaatctcggcgcc
cgcgccgcgcggctcgatttcggcggcggcaccaccatccggcgcggctgggtggatggc
aacatcgtcctccgggaggccggtgccgaaatctcgggccgcttcgacatcgaaggcctg
aagcagtcggcgctgctcttgaaaacgctgaagggcacgctcgaaatgcaggcgggcgaa
ggcaccgccgcgctcatcgcgaccggcgaacgcggcgcgcccttcacgttcgatcttgcc
gcgagcttcgatcccgaaagcattatcgtcaccagccaaggcacgatcgcgcgccagaag
ttcgcgctcgccgcccccgcgcgcctcgatcgcacggaagacggctggcacctcgcgtcc
gtggtgctcaacctgccttcgggcacggccaagatcagcggcacattcggcgaaacggtc
agtctcaccaccgatctcaacgccgccggtctcggcctgcttcagctcgcgttgccgggc
atgaatttcacaggcaccgcgagcggccgcatcgacatgatcttcccctctggcgcgctg
ccgcgcggcacggcgaagctgcgcgtcaccgatttcacgcgcgcgaccgaggccttctcg
aagcccgtcgatctcgccgtcgtcgcgcagctcgaagctaacaaggcggtgatgcgcgcc
gccttcctcgataacggccagcgccttggcatcctgcagggacgcctgctctcgatcccc
ggcagtatcgacgatccttggctcgaccgcctgatgaaggcgccgatctcgggccagctc
cgctggcgcggccctgctgaaatgctctggcctttgaccggcgtcggcgcactcagcgta
cgcggcaacatcgcggtggcgcttgagatcaacggcgagcttggcgatccctcgctcacc
ggcatcgtccggtcgcgggcatcacgtatcgaaagcgcgatcaccggcacggtcgtggac
aatatccgcctcgccggccgtttcacgggctcacgcctggaactcaccgagttttcgggc
actgcgggtacgggctctatttccggcagcggcggcatcgacctttcgttcgcccgcggc
ttccccatcgagattgcgatggtgatgaaatcggcgctcatcctcaatcgcgacgacctc
cgggcgacggcgagcggtcccttgaggatcagcaacagcccggaaggcgccatcatctcg
ggcaacgtgaatatcgatcgtgcccgattcaatatcgggcagaccgcacaggtcgaagtt
cccacgctccgtgtgcgcgagaagaatacggaactcctgcgcgcagacccgttggtcgcg
gagggcacggcagagcccaccgtctggcagctcgatgtgaaggcgcgcggcaataacgag
atcatggtccgcggcatgggcctcgattcggaatggtcggcgaatctcgacatcaagggc
tcggcaaccgcgccgcgcatcggcggcgtcgccgaactcgtgcgcggtgactacgagttc
gcaggcaagaccttccgcctcacgcgcggcgagctgcgcttcaccggcacctatccgccc
gatcccgtggtggacatcgcggcagaggcgcgcgtcgaaggcctcaccgccaccatcacc
atccgcggtaccggccagcgcccggagatcgcgttctcgtcgatccctgcactgccgcag
gacgaagtgctctcgcgcgtgctcttcggtacctcgatctcgaatctctcggcgcctgaa
gcgctgcagctggcgggggcggtcgcttcgcttcagggcggcggaggcggcatcaacccg
atcaacgccgtgcgccgcgcggtcgggctcgatcgtctgcgcatcatggaagcgaaccag
ctcaccggccagaagaccgccgttgcagcaggcgaatacatcacggatcgtgtctacgtg
gaggtcgctacagacgcacagggctacacggcgacgcagctggagatcgagctgacgcgc
gcgctttcgatcctgtcgtcggtcgcgacgctcggcggcaccagcgtcaacctgcgctgg
tcgaaggactattga
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