Sphingosinicella microcystinivorans: SmB9_24640
Help
Entry
SmB9_24640 CDS
T05811
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic00730
Thiamine metabolism
smic01100
Metabolic pathways
smic01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SmB9_24640 (thiC)
Enzymes [BR:
smic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SmB9_24640 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BBE34806
UniProt:
A0AAD1D6J4
LinkDB
All DBs
Position
complement(2622246..2624093)
Genome browser
AA seq
615 aa
AA seq
DB search
MADIPARTEIGVTTGPIRGSRKIYVGPHKVAMREIDLEPTSGEPSVRVYDTSGPYTDPAA
RIDIHAGLPALRRDWILARGDVEAYDAREIRPEDNGQLGPDRSGGVQPFPNVVKRPLRAK
PGMNVSQMHYARRGIITPEMEYVAVRENLGRARLKEYVRDGQDFGAAIPDYVTPEFVRDE
VARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASNVASEVDKMVWAIRWGADT
VMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLIEQAEQG
VDYFTIHAGVRLPYVPLAAKRMTGIVSRGGSIMAKWCLAHHKESFLYERFDEITEIMKAY
DVAYSLGDGLRPGSIYDANDEAQFAELYTLGELTKRAWAQDVQVMIEGPGHVPMHKIKEN
MEKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPDTAEQYH
DQTLPAEGAKSAHFCSMCGPKFCSMKISQEVRDFAAKQNQSADTFIAAEDAAKGMAEMSE
KFKEKGGEIYLPTRE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatccccgcacgcaccgaaatcggcgtcaccaccgggcccattcgcggcagc
cgcaagatctacgtcggcccgcacaaggtcgcgatgcgcgagatcgacctggagccgacc
tccggcgaaccctccgtccgtgtctacgacacctccggcccctacaccgatcccgccgcc
cgcatcgacatccacgccggcctccccgcgctccgccgggactggattctcgcccgcggc
gacgtggaggcctacgacgcccgcgaaatccgcccggaagacaacggccagctcggcccg
gaccgctccggcggcgtgcagcccttccccaatgtcgtgaagcgtcccctgcgcgcaaag
cccggcatgaacgtcagccagatgcactatgcccgccgcggcatcatcacgcccgagatg
gagtatgtcgcggtacgcgagaacctcggccgcgcgcgccttaaagaatacgtccgcgac
ggtcaggacttcggcgccgccatccccgattacgtcacgcccgagttcgtgcgcgacgag
gtggcgcgcggccgcgccatcatcccgaacaacatcaaccacccggaatcagagccgatg
gccatcggccgcaacttcctggtgaagatcaacgccaacatcggcaactcggccgtcgcc
agcaacgtcgcgagcgaggtcgacaagatggtgtgggccatccgctggggcgcggacacg
gtgatggacctttcgacgggccgcaacattcacgacacgcgcgaatggatcctgcgcaac
agccccgtccccatcggcaccgtgccgatctatcaggcgctcgaaaaggtcggcggcatc
gccgaagacctgacgtgggagatcttccgcgacacgctgatcgagcaggccgagcagggc
gtcgactatttcaccatccacgcgggcgtgcgcctgccctacgtccccctcgcggcaaag
cgcatgaccggcatcgtgtcgcgcggcggcagcatcatggcgaaatggtgcctcgcgcat
cacaaggagtcgttcctctacgaacgcttcgacgagattaccgagatcatgaaggcctat
gacgtcgcctactccctcggcgacggcctccgccccggcagcatctacgacgcgaacgac
gaggcgcagtttgccgagctctacacgctcggcgagctcaccaagcgcgcctgggcgcag
gatgtgcaggtgatgatcgaagggccgggccacgtgccgatgcacaagatcaaggagaat
atggaaaagcagctcgaagcctgcggcgaagcgcccttctataccttggggccgctcacc
acagacatcgcgcccggctacgaccatatcaccagcggcatcggcgccgcgcagatcggc
tggtacggcaccgcgatgctttgctacgtcacgccaaaggagcatctcggcctccccgac
cgcgacgacgtgaaggtcggcgtcgtcacctacaagctcgccgcccacgccgccgacctt
gcgaaaggccaccccgccgcgcaggtccgcgacgacgcgctcagcaaagcccgcttcgaa
ttccgctggcgcgaccagttcaacctgtcgctcgatcccgatacggccgagcaataccac
gaccagacgctacccgcggaaggcgccaagtcagcgcatttctgcagcatgtgcggcccg
aaattctgctcgatgaagatcagccaggaagtccgcgacttcgccgcaaagcagaaccag
agcgcggatacgttcatcgcggccgaggacgcggcgaaagggatggcggagatgagtgag
aagtttaaagagaagggtggagagatttatttgccgacgagggagtaa
DBGET
integrated database retrieval system
