Sphingosinicella microcystinivorans: SmB9_29670
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Entry
SmB9_29670 CDS
T05811
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic03420
Nucleotide excision repair
smic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SmB9_29670 (pcrA)
03430 Mismatch repair
SmB9_29670 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smic03400
]
SmB9_29670 (pcrA)
Enzymes [BR:
smic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SmB9_29670 (pcrA)
DNA repair and recombination proteins [BR:
smic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SmB9_29670 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SmB9_29670 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
BBE35309
UniProt:
A0AAD1G231
LinkDB
All DBs
Position
3151015..3153303
Genome browser
AA seq
762 aa
AA seq
DB search
MMSVSVPSSPRDEPPYLSGLNAPQRDAVLTTEGPVLMLAGAGTGKTRALTSRLAHIIYTQ
RAWPSEILAVTFTNKAAREMRERMHGVIGDVSEGLGWLGTFHAVAAKMLRRHAELVGLKS
NFSILDTDDQIRLLKQIITAADLDEKRWPARQFAGLIDKWKNRGWTPETLPKDETWAFAD
GKAGTLYAAYQARLVELNATDFGDLLLHMLTIFAKHRDVLEQYQTRFRYILVDEYQDTNV
SQYLWLRLLAQKHKNICCVGDDDQSIYSWRGAEVANILRFEQDFPGAKVIRLEQNYRSTG
HILGAAGGLIAQNADRLGKTLWTEADSGEKVRVLGVWDGPEEARRVGEEIESLQRRGVSA
DHIAILVRAQYQMAAFEERFMRVGIPFRIIGGPRFFARLEIRDMIAYFRVTSQPADDLAF
ERIVNTPKRGLGDKSLQRLHQFAAATGAPLSVAALDIAGTNEIPAAARRALAQLSENFRR
WREQLLTLPHPELARVILEESGYLAMWQADRSTEAQGRVENLFELTRIMGDFDSMESFLD
HVSLVNDNEEARDEPKVTIMTLHAAKGLEFDHVFLVGWEEGVFPSQRSLDEGGLKSLEEE
RRLAYVGITRAKQEATILHAANRQIYGQWTSSIPSRFVSELPREHIEAETSLSGGASLWR
AALDERDPFADVSRATQRGHGPGWQRAQTYGRPTRAATQIEAKPVSVTVGAAPRRDLSVG
MRVFHQKFGGGTIKGIEGNKLEVAFDHAGEKRVLDSFVEVQG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgtatccgttcccagctcgccccgcgatgaaccgccctatctgagcggcctg
aacgcgccgcagcgcgatgccgtgctgacgacggaaggccccgttctgatgctggcgggc
gcgggaacagggaaaacgcgcgcgctgacctcgcgcctggcgcacatcatctacacgcag
cgcgcctggccttcggaaatcctcgccgtcacgttcaccaacaaggcggcgcgcgagatg
cgcgagcggatgcacggcgtgatcggggacgtgtcggaggggctgggctggctcggcacc
ttccatgccgtcgccgcgaagatgctgcgccgccacgccgagcttgtcgggctcaaatcg
aacttttcgatcctcgacaccgacgaccagatccgcttgttgaagcagatcatcactgcc
gccgatctcgacgagaagcggtggcccgcacgccagttcgccgggctgatcgacaagtgg
aagaaccggggctggacgccggaaacgcttccgaaagacgaaacctgggcattcgcggac
ggtaaggccggcacgctctacgccgcctatcaggcccggctcgtcgagctgaacgcgacc
gatttcggcgatcttctgctgcacatgctcaccatcttcgccaagcaccgcgacgtgctg
gagcagtaccagacgcgcttccgctacatcctcgtcgacgagtatcaggacaccaacgtc
tcgcagtacctgtggcttcgcctgctcgcgcagaagcacaagaacatctgctgcgtgggc
gacgacgaccagtcgatctattcctggcgcggcgcggaggtcgccaacatcctccgtttc
gagcaggatttcccaggcgcgaaggtgatccgcctcgaacagaactaccgctccaccggc
cacatccttggcgcggcgggaggtctcatagcgcagaacgcagatcggctcggcaagacg
ctgtggaccgaggcggacagcggcgaaaaggtccgcgtgctcggcgtgtgggatggcccc
gaagaggcccgccgcgtcggtgaggagatcgaaagcctccagcgccggggtgtctccgcc
gaccacatcgccatcctcgtgcgcgcgcagtatcagatggcagcgttcgaggaacgcttc
atgcgcgtcggcatccctttccgcatcatcggcggcccacgcttctttgcgcgtctcgaa
atccgcgacatgatcgcctacttccgcgtgaccagccagcctgccgacgacctcgccttc
gaacgcatcgtcaacacgcccaagcgcggcctcggcgataaaagcctgcagcgcctgcac
caattcgccgccgccacaggcgcgccgctctcggtcgccgcgttggacatcgccggcacg
aacgaaatccccgccgccgcccgcagggcgctcgcgcaactatccgagaacttccggcgc
tggcgcgaacagctcctcacgctccctcacccggaattggcgcgcgtcattctggaagag
tcgggctatctcgcaatgtggcaggccgaccgttccaccgaggcgcaagggcgtgtcgaa
aacttgttcgaactgacacgcattatgggcgattttgattcaatggaatcgttcttggat
cacgtcagcctcgtgaatgacaacgaggaagcaagagatgagcccaaggttaccattatg
acgcttcatgccgcaaaagggctggagttcgatcacgtcttcctcgtcggctgggaggaa
ggtgtcttcccctcgcagcgctcgctcgacgaaggcgggctcaaaagcctggaagaggaa
cgccgcctcgcctacgtcggcatcacccgcgcgaagcaggaggccacgattctccacgca
gcaaaccggcaaatctacggccagtggacctcgtccatcccctcacgcttcgtcagcgaa
ctgccgcgcgagcatatcgaggccgaaacctcgctctccggcggcgcctcgctctggcgt
gccgcgctcgacgagcgcgaccccttcgccgatgtgagccgcgccacccagcgcggccac
ggccccggctggcaacgcgcccaaacctacggccgccccacccgcgctgcgacgcagatc
gaggcgaagcccgtctcggtcaccgtcggcgccgccccgcgccgcgacctctccgtcggg
atgcgcgtcttccaccagaagttcggcggcggcacgatcaaggggatcgagggcaacaag
cttgaagtcgcgttcgaccacgcgggcgaaaagcgggtgctcgacagttttgttgaggtg
caggggtag
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