Sphingosinicella microcystinivorans: SmB9_35360
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Entry
SmB9_35360 CDS
T05811
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic00470
D-Amino acid metabolism
smic00550
Peptidoglycan biosynthesis
smic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SmB9_35360 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SmB9_35360 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smic01011
]
SmB9_35360 (murD)
Enzymes [BR:
smic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SmB9_35360 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
smic01011
]
Precursor biosynthesis
Amino acid ligase
SmB9_35360 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Peripla_BP_4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BBE35878
UniProt:
A0AAD1G2J3
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All DBs
Position
complement(3756945..3758276)
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AA seq
443 aa
AA seq
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MITARAFSTRHYAVFGLARTGLSVVEALRASGATVTAWDDDEKKRAALPDDVRVADINTA
DLSAFDGIVVSPGVPLNTHPLAARAAAAGVPVLGDIELFAHARTELPPHKVVGITGTNGK
STTTALIHHILAHAGVPAAMGGNIGLPILSQDALPDGGVYVLELSSFQIDLTQSLASDVA
ILTNITPDHLDRYDGMAGYAASKERLFDMLDEGATAIFLSDDDYTAAIAKGRGGVPVSFE
TVLAEGVSLVNGAAYIDGEPLGYQADWPSLAGPHNAQNAVAAIAATRALGLDAAAIKAGL
ETYPGLAHRMERVAEIGGVLYVNDSKATNPTSTAPALAAYPAIHWIVGGKRKTDELDACL
PYLDHVRAAYVIGDAEVVYAHLLGAYVPVIRAGTVERATQLAAGAAKPGEVVLLSPACAS
YDQFRDFEQRGDVFKAAVQELGV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgcgcgcgccttttccacccggcactacgccgtcttcggcctcgcccgtacc
gggctgagcgtcgttgaggccttgcgggcatccggcgcgacggtcacggcgtgggacgac
gatgaaaagaagcgcgcggcgcttcccgacgacgtgcgcgtcgccgacatcaacacggcg
gatctttcggcgttcgacggcatcgtcgtgtcgccgggcgtgccgctcaacacgcatccg
ctggccgcgcgcgccgcggcggcgggcgttccggtgctgggcgacatcgaacttttcgcg
cacgcgcgcaccgagttgccgccgcacaaggttgtcggcatcacaggtaccaacggcaaa
tcgacgacgactgcgcttatccatcatatcctcgcgcacgcgggtgtgcccgcggcgatg
ggcggcaacatcggtctgccgatcctgtcgcaggacgccctgcccgacggcggcgtttac
gtgctggagctctcctcgttccagatcgacctgacgcagagcctcgccagcgacgtggcg
atcctcaccaacatcacgcccgatcacctcgaccgctacgatggcatggcgggttacgcc
gcgtcgaaagaacgcctgttcgacatgctggatgagggcgccaccgccatcttcctttcg
gacgacgactatacggcggccattgcaaaggggcggggcggtgttcccgtgtcgttcgaa
accgttcttgccgaaggcgtctcgctggtgaacggtgcggcctatatcgacggcgagccg
cttggctatcaggcggattggccttcgctcgccgggccgcacaatgcgcagaacgcggtg
gctgcgattgcggcgacgcgggcgctcggcctcgatgccgctgcgatcaaggccgggctt
gaaacctatccgggtcttgcgcaccgcatggaacgtgtcgcggaaatcggcggcgtgctc
tacgtcaatgacagcaaggccacgaacccgacctcgaccgcgcccgcgcttgcagcctat
ccggcgatccactggatcgtgggcggcaagcgcaagacggacgagctcgatgcgtgtctg
ccgtatctcgatcatgtgcgtgccgcttacgtgatcggggatgccgaggtggtttatgcg
cacctgctcggcgcctatgtgccggtgatccgggcggggactgtggagcgggcgacgcaa
ctggcggcgggtgccgcgaagccgggcgaggtcgtgctcctgtctccggcctgcgcgtcc
tacgaccagtttcgggatttcgaacagcgcggcgacgtcttcaaggccgccgtgcaggag
cttggcgtatga
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