Sphingosinicella microcystinivorans: SmB9_37130
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Entry
SmB9_37130 CDS
T05811
Name
(GenBank) hypothetical protein
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic02020
Two-component system
smic02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SmB9_37130
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SmB9_37130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smic03000
]
SmB9_37130
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
smic02035
]
SmB9_37130
Transcription factors [BR:
smic03000
]
Prokaryotic type
Helix-turn-helix
Other families
SmB9_37130
Bacterial motility proteins [BR:
smic02035
]
Flagellar system
Flagellar assembly proteins
Others
SmB9_37130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
AAA_2
AAA
bpMoxR
AAA_7
AAA_3
AAA_19
nSTAND3
AAA_22
MCM
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BBE36055
UniProt:
A0AAD1G2T4
LinkDB
All DBs
Position
3934312..3935439
Genome browser
AA seq
375 aa
AA seq
DB search
MTVATGAAAGGILAELESLLIGRSEAIVRVRNLIMRLAGSQASVLVTGPSGTGKEVVARC
LHLASARRNNEFVAVNCGAIPRELIESELFGHEKGAFTGALQSRKGRFEAADGGTIFLDE
IGDMPADMQVKLLRVLEERKIERVGSNKTMGIDVRVVSATHKNLEQAIAEGRFREDLFYR
LNIFPLQLPALADRREDIPMLVAHFLKLSGTKVRFDASALRALCQHNWPGNIRELRNVVE
RAVVLFGEGDISVDDIEILLGATLERREPLNEESAIWDATTVSEEEADTRLPATTVVPLH
PNGDSLDMDPRALIGAGKCDMRALVAKLEQSLIHAALEQSGDIVADAARVLGLQRTSLIE
KMRKYQIGRGERVAA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgcaacgggggctgcagcgggcggcattctagccgaactcgaatcactgctt
atcggtcgcagtgaagcgatcgtccgagtccgaaatctcatcatgcgtctcgcaggttcg
caggcatccgtgctcgtcacgggcccatcgggcaccggcaaggaagtcgttgcgcgctgc
cttcacctcgcttcggcccgccgcaacaatgaattcgtcgccgtgaactgcggcgccatc
ccgcgcgagctcatcgaatcggaactcttcggccacgaaaagggcgccttcaccggcgcg
ctgcagagccgcaagggccgcttcgaggctgctgacggcggcaccatcttcctcgacgaa
atcggcgacatgcctgccgacatgcaggtgaagctgctgcgcgtcctcgaagagcgcaag
atcgagcgcgtcggcagcaacaagacgatgggtatcgatgtgcgcgtcgtttccgccacg
cacaagaacctggagcaggcgatcgccgagggccgcttccgtgaagacctcttctatcgc
ctcaacatcttcccgctgcagctgccggccctggccgaccgccgcgaggacattccgatg
ctggtcgcacacttcctgaagctgtcgggcaccaaggtgcgcttcgacgcttcggcgctg
cgcgcgctctgccaacacaactggcctggaaatatccgcgagctgcgcaacgtcgtcgaa
cgcgcggtcgtgcttttcggcgaaggcgacatcagtgtcgacgatatcgagatcctgctc
ggcgcgacgctggagcgccgcgaaccgctgaatgaagagtccgcgatctgggatgcaacg
acggtttccgaagaagaagcggatacgcgtttgcctgcgaccacagtggttccgctgcac
ccgaacggtgacagcctcgacatggacccgcgcgcgctcatcggtgccggcaagtgcgac
atgcgcgcgctcgtcgcgaaactcgaacagtcgctgatccacgctgcgctcgaacagagc
ggcgatatcgtcgccgacgccgctcgcgtcctcggcctgcagcgcacttcgctcatcgag
aagatgcgcaaataccaaatcggccgcggcgaacgcgtcgccgcctag
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