Streptococcus milleri: NCTC11169_00187
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Entry
NCTC11169_00187 CDS
T09563
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
smie
Streptococcus milleri
Pathway
smie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC11169_00187 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smie03021
]
NCTC11169_00187 (rpoC)
03400 DNA repair and recombination proteins [BR:
smie03400
]
NCTC11169_00187 (rpoC)
Enzymes [BR:
smie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC11169_00187 (rpoC)
Transcription machinery [BR:
smie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC11169_00187 (rpoC)
DNA repair and recombination proteins [BR:
smie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC11169_00187 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
VEE11174
UniProt:
A0A448B9E2
LinkDB
All DBs
Position
1:179758..183396
Genome browser
AA seq
1212 aa
AA seq
DB search
MVDVNRFQSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIICDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGQGSFVAKMGAEAIQDLL
KQVDLEKEIAELKDELKTATGQKRVKAIRRLDVLDAFQKSGNKPEWMVLNILPVIPPDLR
PMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERNDERIWDILEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMALRNGYVHLHTRVGI
ATDSLNKPWTENQKHKILLTTVGKILFNDIMPDELPYLQEPNASNMAEGVPAKYFLEPGQ
DVKAAISKLELNVPFKKKNLGNIIAEIFKRFRTTETSAFLDRLKDLGYHHSTLAGLTVGI
ADIPVVEDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLVANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRSITDGKEMIEPLE
ERLIGRYTKKSVKHPETGEIIVGPDVLITEDMAHEIVSAGVEEVTIRSVFTCNTRHGVCR
RCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGEVTAIEEDASTRTKKVFVKGATGEGEYVVPFTARMKVAVGDKI
SRGAALTEGSIQPKHLLAVRDVLSVETYLLAEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RVMDPGDTDLLMGTLMDITDFTDANRDVVISGGVPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAVNEVEIIEDTT
VTEPVEETTTVE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtggttgatgtaaatcgttttcaaagtatgcaaatcaccctagcttctcctagtaaagtc
cgctcttggtcttatggggaagtgaagaaacctgaaacaattaactaccgcacactaaaa
ccagaacgcgaagggctttttgatgaagtcatctttggtcctacgaaagactgggaatgt
gcgtgtggaaaatataaacggattcgttataaaggaatcatttgtgaccgttgtggtgtt
gaagtaactcgtactaaagttcgtcgtgaacgtatgggacatattgagttgaaagcacct
gtctctcatatttggtattttaaaggaatcccaagccgaatgggcttgaccttggacatg
agccctcgtgcccttgaggaagtcatctattttgcagcttatgtggtgattgatcctaaa
gatacaccacttgagcacaaatccattatgacggagcgggaatatcgtgaacgcttacgg
gaatatggtcaaggctcctttgttgcaaaaatgggtgctgaagcaattcaagatctcttg
aaacaagtagatttggaaaaagaaattgcagagctcaaagatgaattaaaaacggcaact
ggacaaaaacgtgtcaaggctattcgtcgtttggatgttttagatgccttccaaaaatct
ggtaacaaaccagaatggatggtcttaaacatcttgccagttattccgccagacttacgt
ccaatgcttcagttggatggtgggcgcttcgcttcttctgacttgaatgacctttaccgt
cgtgttatcaatcggaataatcgtttggcacgtcttttggaactaaatgctcctggaatc
atcgtgcaaaatgaaaagcggatgttgcaagaagcggttgatgctttgattgacaatggt
cgtcgtggtcgtcctattactggaccaggtagccgcccgctcaaatcattgagtcacatg
ctcaaagggaaacaaggtcgtttccgtcaaaacttgctgggtaaacgggttgatttctca
ggacgttcggttattgcagttggtccgacactcaagatgtaccaatgtggtgtgccacgt
gaaatggctattgagcttttcaagccatttgtcatgcgtgaaattgtcgcgcgtgatatt
gtgcaaaatgtcaaagctgctaagcgcttggtagaacggaatgatgaacgcatctgggat
attttagaagatgtgattaaagaacacccagtgctccttaaccgcgcaccgacgcttcac
agattaggaattcaagcgtttgagccagttttgattgacggaaaagctcttcgtttgcac
ccacttgtgtgtgaggcttataatgccgactttgatggagaccaaatggcgatccacgtg
cccttgtcagaagaagcccaagcagaagcacggattctcatgctggcagctgagcacatc
ctcaatccaaaagacgggaagccagtagtaaccccttcacaggatatggtcttggggaac
tactacctaactatggaagaagctggtcgtgaaggagaaggaatggtctttaaagaccgt
gatgaagctgtaatggctctccgtaatggctatgttcacttacatacgcgtgttgggatt
gcgacggatagtttaaacaaaccatggacagaaaatcaaaaacacaagatcctcttgaca
acagtgggtaagattcttttcaatgatatcatgccagatgaattaccatatttgcaagag
ccaaatgcctcaaacatggcagaaggtgtgccagctaagtatttcttagaacctggtcaa
gatgtcaaagcagctatcagtaagctggaattaaatgtgccattcaagaagaaaaatctt
ggaaatatcatcgctgaaatcttcaaacgcttccgtacaactgaaacatctgctttcctt
gaccgtttgaaagatctcggctatcatcattcaacgttagcaggcttgacagtaggaatt
gctgatattccggtcgttgaagataaggcagaaattatcgaagagtcccacaaacgtgta
gaacaaatcaccaaacaattccgtcgtggtatgattacagacgatgaacgctacaatgca
gttactgctgaatggcgtgcagctcgtgaaaaattggaaaaacgtttggttgccaaccaa
gatcctaagaatccaatcgttatgatgatggattctggagcccgtggtaacatttctaac
ttctcacaacttgctggtatgcgtggtttgatggccgctcctaatggccgcatcatggaa
ttgcctattctatctaacttccgtgaaggtttgtctgttttggaaatgttcttctctact
cacggtgctcgtaaagggatgactgatacagcccttaaaacagctgactcaggttatctg
actcgccgtttggttgatgtggcgcaagatgtgattatccgtgaagacgactgtggaacc
gatcgtggtcttgttatccgctcaattactgatggtaaggaaatgattgagccattagaa
gaacgtttgattggtcgttatacgaagaaatcggttaaacatcctgaaacaggcgaaatc
atcgttggtccagatgtattgattacagaagatatggcgcatgagattgttagcgctggt
gtcgaagaagtcactattcgctctgtctttacatgtaatacacgtcatggggtttgtcgt
cgttgttacggtatcaacttggcaacgggcgatgcggttgaagtcggtgaggcagtcgga
acgattgctgctcaatctatcggtgaacctggtacacagcttacaatgcgtactttccac
acgggtggtgttgcgtctaataccgatatcacacaaggtcttcctcgtgtccaagaaatc
tttgaagcccgcaatccgaaaggggaagcagttattactgaagtcaaaggcgaggtgact
gcgattgaagaagacgcttctactcggactaagaaagtctttgttaaaggggcaactggt
gagggggaatatgtagtaccatttacagctcgtatgaaagtagcagtaggggataaaatc
tctcgtggcgctgctctgacagaaggttctatccaacctaagcacttgctggctgttcgt
gatgtcttgtctgttgaaacttacttgcttgctgaagtacaaaaagtttaccgcagccaa
ggggtagaaatcggtgacaagcacatcgaggtaatggttcgtcagatgattcgcaaagtg
cgtgtcatggatccaggagatacagaccttctcatgggtacactcatggatatcacagac
tttaccgatgctaaccgtgatgtggtcatctctggaggagttccggcaactgctcgccca
gtcctcatgggaattactaaagcatcccttgaaacaaatagtttcttgtcagctgcttcc
ttccaagaaaccactcgtgtcctcacagacgcggctatccgtggtaagaaagaccacttg
cttggtctcaaagaaaatgttatcattggtaaaatcatcccagctggtacaggtatggct
cgttaccgtaaccttgaaccacaagctgtcaatgaagtcgaaattatcgaagatacaact
gtaacagaacctgtggaagaaaccactacagtagaataa
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integrated database retrieval system
