Streptococcus milleri: NCTC11169_00343
Help
Entry
NCTC11169_00343 CDS
T09563
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
smie
Streptococcus milleri
Brite
KEGG Orthology (KO) [BR:
smie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smie03019
]
NCTC11169_00343 (cshB)
03009 Ribosome biogenesis [BR:
smie03009
]
NCTC11169_00343 (cshB)
Enzymes [BR:
smie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC11169_00343 (cshB)
Messenger RNA biogenesis [BR:
smie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11169_00343 (cshB)
Ribosome biogenesis [BR:
smie03009
]
Prokaryotic type
rRNA helicases
NCTC11169_00343 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
VEE11461
LinkDB
All DBs
Position
1:337041..338384
Genome browser
AA seq
447 aa
AA seq
DB search
MEFTEFKFKDYIQEALKDLNFVEATEVQEKLIPVVLAGRDLVGESKTGSGKTHTFLLPIF
QKLNEDADSVQVVITAPSRELARQIYQAARQIAAFSDKEIRVAHYVGGTDKNRQIGKLSS
SQPHIVIGTPGRIYDLVESGDLAIHKAHTFVVDEADMTLDMGFLMTVDKIASSLPKDLQF
LVFSATIPQKLQPFLKKYLSNPVIEQIKTKTVISDTIENWLISTKGRDKNAQIYEITQLL
QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVKNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKM
GIHFNPKMIKNGEFQDTYDRDRRANREKTQEKLDTEMIGLVKKKKKKIKPGYKKKIQWAV
NEKRRKTKRAENRARGRAERKAKRQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacagaatttaagtttaaagattacattcaagaggcactcaaagatttgaac
tttgttgaggcgacagaagtccaggaaaaactcattccggttgtgcttgctggtcgtgac
ttggtaggtgagtccaaaacaggctcagggaaaacccacacttttttgctgccgattttt
caaaagctaaatgaagacgcagatagtgttcaggtcgtcattaccgctcctagtcgtgag
ctggctaggcagatttatcaggctgcacgtcaaattgctgctttctctgacaaggaaatc
cgagtggctcattacgttggtggaactgataaaaatcgtcagattgggaaattgagttct
agtcaaccgcacatcgtcattggcacgccgggccgcatttatgatttggtcgaatcaggt
gacttagccattcataaggcacatacttttgtcgttgatgaagcagatatgacgcttgat
atgggatttttaatgacggtggataagattgcgtccagtttgccaaaggatttgcaattt
ctggtcttttctgcgactattccgcaaaaattgcagccatttttaaaaaaatatctatca
aaccctgtcattgagcaaatcaagaccaaaacagttatttcagataccattgaaaattgg
ctgatttcgacaaaaggacgtgataagaatgcgcagatttatgaaatcacacagctgtta
cagccgtatctagctatgatttttgtcaatactaagacacgagcggatgaattgcatagc
tatctgacggcgcaaggtctcaaggtggcaaagattcatggggatattgcaccgcgggag
cgaaaacggattatgaatcaggtgaagaacctagattttgaatacattgttgcgacagat
ttagctgcgcggggaattgatattgaaggcgttagtcatgtcatcaatgatgcgattccg
caagatttgtccttcttcgttcaccgagtgggacgaactggcagaaatggtctatcggga
acagccattacactttatcaaccgagcgatgattcagatattcgtgagctggagaaaatg
ggtattcacttcaatcccaagatgattaaaaacggagaatttcaagatacctatgaccgc
gatcgccgtgccaatcgtgaaaaaacgcaggaaaaattggacacggaaatgattggtctg
gttaaaaagaaaaagaagaaaatcaaaccgggctataagaaaaaaatccagtgggctgtc
aatgaaaaacgccgtaagacaaaaagagctgaaaatcgcgcacgcggtcgtgcagaaaga
aaagcgaaacgtcaaagtttttag
DBGET
integrated database retrieval system
