Streptococcus milleri: NCTC11169_00509
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Entry
NCTC11169_00509 CDS
T09563
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
smie
Streptococcus milleri
Pathway
smie03030
DNA replication
smie03430
Mismatch repair
smie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11169_00509 (holA)
03430 Mismatch repair
NCTC11169_00509 (holA)
03440 Homologous recombination
NCTC11169_00509 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smie03032
]
NCTC11169_00509 (holA)
03400 DNA repair and recombination proteins [BR:
smie03400
]
NCTC11169_00509 (holA)
Enzymes [BR:
smie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11169_00509 (holA)
DNA replication proteins [BR:
smie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11169_00509 (holA)
DNA repair and recombination proteins [BR:
smie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11169_00509 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DUF494
CEP152_CC2
Motif
Other DBs
NCBI-ProteinID:
VEE11784
LinkDB
All DBs
Position
1:501267..502304
Genome browser
AA seq
345 aa
AA seq
DB search
MLAIEEIKTVNVTNLPNLTILSGDDTGQFEAMKSQFLRQIRYNAADLNMAYFDMKEAVYP
DVEIDLVSLPFFSEEKIVILDHFLDVTTTKKRYLTDDELKSFEQYLENPADTTKLVIFAE
GKLDSKRRIVKLLKRDGKMFEATEPKEQELRTYFSKQVQEQGLELRSQVLEELLIKSGFD
FSEISKNLAFLKDYKKDGIITSDDIAEAIPKTLQDNIFDLTQMILQQKVDAARSLVRDLT
LQGEDEIKLIAIMLGQFRIFTQVKILFENGRNESQIVADLSSYLGRKVNPFQIKYALRDV
RSLQLDFLKKVLACLIETDYQIKSGVYEKSYLFDLALLKIATHNL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgttagcgattgaagagattaaaacagtaaatgtgacaaatttacctaatctgacgatt
ttaagtggtgatgatacaggtcaatttgaagcaatgaaatcacaatttttacgccaaatt
cgatataatgcggcagatttaaatatggcttattttgatatgaaagaagctgtttatcca
gatgtggagattgatttagtgagtttgcccttcttttctgaagagaagatcgtcattttg
gatcattttttggatgtgacaacaactaaaaaacgctatttgacggatgatgagctaaaa
tcttttgagcaatatttggagaatcccgcagatacaacgaaattagtcatttttgcggaa
ggaaagttagatagcaaacggcgaattgtaaagctgctcaaacgggatggcaaaatgttt
gaagcaactgagcccaaagaacaagaattacgcacctactttagtaagcaagttcaagaa
caggggttagaacttcgttcgcaagttttagaagaattgctaattaagtctggtttcgat
tttagtgaaatcagcaaaaacctagcttttttaaaggactataaaaaagatggaatcatt
acaagtgatgacattgctgaagcgattccaaagactttgcaggacaatatttttgacttg
acccagatgattttgcagcaaaaggtagatgcggcaagaagcctagtgcgcgatttgaca
ttgcaaggtgaagacgaaatcaagctgattgcgattatgctgggacagtttcggatattt
acgcaagtgaaaatcctctttgaaaatggacgtaacgaaagtcagattgtagcagacttg
tccagttatttaggacgaaaggtaaatccttttcaaatcaaatatgccttacgtgatgtg
cgatctttacagcttgattttctaaaaaaagtacttgcttgcttgattgaaacagattac
caaatcaagtctggagtttatgagaaaagttacttatttgacttggctttgttaaagatt
gctacccacaacttataa
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