Streptococcus milleri: NCTC11169_01040
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Entry
NCTC11169_01040 CDS
T09563
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smie
Streptococcus milleri
Brite
KEGG Orthology (KO) [BR:
smie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smie03016
]
NCTC11169_01040 (truB)
Enzymes [BR:
smie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC11169_01040 (truB)
Transfer RNA biogenesis [BR:
smie03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC11169_01040 (truB)
Prokaryotic type
NCTC11169_01040 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
VEE12642
LinkDB
All DBs
Position
1:complement(1048316..1049194)
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AA seq
292 aa
AA seq
DB search
MNGIINLKKEAGMTSHDAVFKLRKILGMKKIGHGGTLDPDVVGVLPIAVGKATRLVEFMQ
DEGKVYEGEVTLGFSTTTEDASGEQVAFSPVTEALDEKLVDQVIASMVGEQTQVPPMYSA
IKVNGRKLYEYARAGEVVERPKRQVIIYNFERTGAIVYESNLARFPFRVKCSKGTYVRTL
AVDLGAKLGYDSHMSKLTRTAAAGMDLEEALTLAEIDEKVNKGDFSFLQPIEFGIGDLPK
VNLTEEQVEEVRFGRFIHIDTKAGQVAGFYQGKLQVILEKRDKEYKPRKVFL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaattatcaatttaaaaaaagaagcgggaatgacctcgcatgatgcggttttt
aaactgcgtaaaattttaggaatgaaaaaaatcggtcatggtgggactttagacccagat
gtggtgggtgtattgcccattgcagtcgggaaggccacgcgattggtagaatttatgcaa
gacgaaggtaaagtgtatgaaggagaggtcactttaggtttttcgacaacgacagaggat
gccagtggagaacaggtggctttcagtcctgtgacagaagcgctagatgaaaaattagtg
gatcaagtcattgccagtatggttggagaacagacccaagtgccacctatgtactcggct
atcaaggtcaatggacgaaaactctatgagtatgctcgagctggggaggtagtagagcga
ccaaagcgtcaggtaataatttacaactttgagcggacaggagctattgtctatgaaagt
aacttggcacgttttccttttcgagttaaatgcagcaagggaacctatgtgcgaacattg
gcagttgatttaggagcgaagttgggttatgattcccatatgtctaaactgactcgcact
gctgcggctggtatggatttggaagaagctttgactttagcagaaattgacgagaaggtg
aacaaaggagatttttcatttttgcaacccattgaattcggcataggagatttacctaag
gtaaaccttacggaagagcaggttgaagaagtacgatttggacgctttattcatatagat
accaaggcaggacaggtggctggtttttatcaagggaaattacaagttattttagaaaag
cgcgacaaagaatataaacctagaaaagtatttctttaa
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