KEGG   Streptococcus milleri: NCTC11169_01292
Entry
NCTC11169_01292   CDS       T09563                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
smie  Streptococcus milleri
Pathway
smie03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smie00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC11169_01292 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smie03019]
    NCTC11169_01292 (deaD)
   03009 Ribosome biogenesis [BR:smie03009]
    NCTC11169_01292 (deaD)
Enzymes [BR:smie01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NCTC11169_01292 (deaD)
Messenger RNA biogenesis [BR:smie03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NCTC11169_01292 (deaD)
Ribosome biogenesis [BR:smie03009]
 Prokaryotic type
  rRNA helicases
   NCTC11169_01292 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22
Other DBs
NCBI-ProteinID: VEE12854
LinkDB
Position
1:complement(1282689..1284293)
AA seq 534 aa
MFYKVASHYLFRKKKKLKFNELHLSAELLAEIEKAGFVEASPIQEQTIPLAMAGKDVIGQ
AQTGTGKTAAFGFPTLEKINTENPVVQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVY
GGSSIEKQIKALRSGAHIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDI
EAIISRVPEERQTLLFSATMPDAIKRIGVKFMKEPTHVKIAAKELTTELVDQYYIRVKEN
EKFDTMTRLMDMEQPELSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRD
FKNDNLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVA
PNEMGYLQIIERLTKKRMKGMKPATAQEAFQAKKKVALKKIERDFADESIRNQFEKFGKD
ARKLAAEFTPEELALYILTLTVQDPDTLPEVEIAREKPLPFKYVSGANKGNRNSKNGRRS
NDRRDRTNGRDNYKKGGRHDRFDKEKRYRKDHKKPRNTSSEKKTGFVIRNKGDK
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgttttataaggtagcttcgcactacctttttagaaagaagaaaaaattgaaatttaat
gaattacatttgtctgctgaattgttagcagaaattgaaaaagcaggctttgttgaagcc
agtccaatccaagaacaaacaatcccgcttgctatggcaggaaaagatgtgattggacaa
gctcagactggtacaggaaagacagctgcttttggttttccaactctcgaaaaaattaac
acagaaaatcctgttgttcaggctttagtcattgcaccaactcgtgaattggctgttcaa
agtcaagaggaactcttccgctttggtcgaagcaaaggagtgaaagttcgctcggtttat
ggtggatctagcattgaaaagcaaatcaaggctctccgttcaggcgcgcacattgtcgtt
ggaactccaggacgtttattagacctcattaagcgcaaagcactgaaactcaatcatgta
gaaacgcttattttagacgaagcggatgaaatgctcaatatgggtttcttagaagacatt
gaagcaatcatctcacgcgtgccggaagagcgtcagacccttctcttttcagctactatg
ccagatgctatcaagcggattggcgtgaagtttatgaaagagccaacacatgtcaaaatt
gcagcaaaagaattgacaacagaactggtggatcaatattatatccgtgtaaaagaaaat
gaaaaatttgataccatgacacgtctcatggatatggaacaaccagaactttctatcgtt
tttgggcgtactaagcgccgtgttgatgagttaacaagaggattaaaactgcgtggctat
cgtgcggaagggattcatggggatctcgatcaagggaaacgtctgcgtgttcttcgggat
tttaaaaatgataaccttgacattttggtcgcgacagatgtggcggctcgtggtctcgat
atttcgggcgtcactcatgtttataactatgatattccgcaagaccctgaaagttatgtt
catcgcattggtcgtacaggtcgtgctggtaagcacggtcagtcaatcacttttgtggct
cccaatgaaatgggctatcttcaaattattgaaaggctcactaaaaaacgcatgaaaggc
atgaaacccgctacagcgcaagaagcctttcaagctaagaaaaaagttgcactcaaaaag
attgagcgagattttgcagatgaaagtattcgcaaccaatttgaaaagtttggcaaagat
gctcgcaagctggcagctgaatttacaccggaggaattggctttatatatattgacctta
accgtacaagatccagacactctaccagaagtagaaattgcgcgtgaaaagccattacca
tttaagtatgtttcgggagctaataaaggcaatcgtaacagcaaaaatgggcgtcgtagt
aatgatcgtcgtgaccgtactaatgggcgtgacaattacaaaaagggtggtcgccacgat
cgctttgacaaagaaaagcgttaccgcaaagaccacaaaaaacctcgtaatacttcaagt
gagaagaaaacaggatttgtcatccgtaataaaggtgataagtaa

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