Streptococcus milleri: NCTC11169_01292
Help
Entry
NCTC11169_01292 CDS
T09563
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smie
Streptococcus milleri
Pathway
smie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11169_01292 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smie03019
]
NCTC11169_01292 (deaD)
03009 Ribosome biogenesis [BR:
smie03009
]
NCTC11169_01292 (deaD)
Enzymes [BR:
smie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC11169_01292 (deaD)
Messenger RNA biogenesis [BR:
smie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11169_01292 (deaD)
Ribosome biogenesis [BR:
smie03009
]
Prokaryotic type
rRNA helicases
NCTC11169_01292 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEE12854
LinkDB
All DBs
Position
1:complement(1282689..1284293)
Genome browser
AA seq
534 aa
AA seq
DB search
MFYKVASHYLFRKKKKLKFNELHLSAELLAEIEKAGFVEASPIQEQTIPLAMAGKDVIGQ
AQTGTGKTAAFGFPTLEKINTENPVVQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVY
GGSSIEKQIKALRSGAHIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDI
EAIISRVPEERQTLLFSATMPDAIKRIGVKFMKEPTHVKIAAKELTTELVDQYYIRVKEN
EKFDTMTRLMDMEQPELSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRD
FKNDNLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVA
PNEMGYLQIIERLTKKRMKGMKPATAQEAFQAKKKVALKKIERDFADESIRNQFEKFGKD
ARKLAAEFTPEELALYILTLTVQDPDTLPEVEIAREKPLPFKYVSGANKGNRNSKNGRRS
NDRRDRTNGRDNYKKGGRHDRFDKEKRYRKDHKKPRNTSSEKKTGFVIRNKGDK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttttataaggtagcttcgcactacctttttagaaagaagaaaaaattgaaatttaat
gaattacatttgtctgctgaattgttagcagaaattgaaaaagcaggctttgttgaagcc
agtccaatccaagaacaaacaatcccgcttgctatggcaggaaaagatgtgattggacaa
gctcagactggtacaggaaagacagctgcttttggttttccaactctcgaaaaaattaac
acagaaaatcctgttgttcaggctttagtcattgcaccaactcgtgaattggctgttcaa
agtcaagaggaactcttccgctttggtcgaagcaaaggagtgaaagttcgctcggtttat
ggtggatctagcattgaaaagcaaatcaaggctctccgttcaggcgcgcacattgtcgtt
ggaactccaggacgtttattagacctcattaagcgcaaagcactgaaactcaatcatgta
gaaacgcttattttagacgaagcggatgaaatgctcaatatgggtttcttagaagacatt
gaagcaatcatctcacgcgtgccggaagagcgtcagacccttctcttttcagctactatg
ccagatgctatcaagcggattggcgtgaagtttatgaaagagccaacacatgtcaaaatt
gcagcaaaagaattgacaacagaactggtggatcaatattatatccgtgtaaaagaaaat
gaaaaatttgataccatgacacgtctcatggatatggaacaaccagaactttctatcgtt
tttgggcgtactaagcgccgtgttgatgagttaacaagaggattaaaactgcgtggctat
cgtgcggaagggattcatggggatctcgatcaagggaaacgtctgcgtgttcttcgggat
tttaaaaatgataaccttgacattttggtcgcgacagatgtggcggctcgtggtctcgat
atttcgggcgtcactcatgtttataactatgatattccgcaagaccctgaaagttatgtt
catcgcattggtcgtacaggtcgtgctggtaagcacggtcagtcaatcacttttgtggct
cccaatgaaatgggctatcttcaaattattgaaaggctcactaaaaaacgcatgaaaggc
atgaaacccgctacagcgcaagaagcctttcaagctaagaaaaaagttgcactcaaaaag
attgagcgagattttgcagatgaaagtattcgcaaccaatttgaaaagtttggcaaagat
gctcgcaagctggcagctgaatttacaccggaggaattggctttatatatattgacctta
accgtacaagatccagacactctaccagaagtagaaattgcgcgtgaaaagccattacca
tttaagtatgtttcgggagctaataaaggcaatcgtaacagcaaaaatgggcgtcgtagt
aatgatcgtcgtgaccgtactaatgggcgtgacaattacaaaaagggtggtcgccacgat
cgctttgacaaagaaaagcgttaccgcaaagaccacaaaaaacctcgtaatacttcaagt
gagaagaaaacaggatttgtcatccgtaataaaggtgataagtaa
DBGET
integrated database retrieval system