Streptococcus milleri: NCTC11169_01676
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Entry
NCTC11169_01676 CDS
T09563
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
smie
Streptococcus milleri
Pathway
smie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC11169_01676 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smie03400
]
NCTC11169_01676 (recD)
Enzymes [BR:
smie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC11169_01676 (recD)
DNA repair and recombination proteins [BR:
smie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11169_01676 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
HHH_5
UvrD_C
AAA_12
Herpes_Helicase
AAA_22
nSTAND3
RsgA_GTPase
5_3_exonuc
AAA_28
AAA_29
NPHP3_N
Mef1
FtsK_SpoIIIE
SLFN-g3_helicase
NTPase_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
VEE13220
LinkDB
All DBs
Position
1:1649894..1652248
Genome browser
AA seq
784 aa
AA seq
DB search
MEFYFSGTIERIIFENPSSFFRILLLDIDDTDADFDDFEIIVTGTMADIMEGEDYTFWGN
LVQHPKYGEQLKITRYERAKPTSKGLVKYFSSDHFKGIGVKTAQKIVDLYGDNTIDKVLA
EPEKLKDIAGLSAKNREAFLTKLRQNYGTERILAKLSEYGIPNKLAFQVQDFYKEETLEI
VEHYPYQLVEDIQGIGFKIADQLAQSLGIEGTAPERFCAGLLHTLLTQSMEKGDTYLEAK
ELLEHTIELLESSRQIELDPSSVADELAHLIEEDKVQNIDTKIFENSLFFAEEGIRSNLL
HILEKGKQNKFEPKKIEAAIAQIENEFAISYDVTQKQAICDAINHKIFILTGGPGTGKTT
VINGIIAVYALLHGLDLRKSQDLPILLAAPTGRAARRMNELTGLPSATIHRHLGMTGDDD
TSHLDDYLDADFIIVDEFSMVDTWLANQLLSNISSNTKLLIVGDADQLPSVSPGQVLADL
LKIPLLPQTKLEKIYRQSKDSTIVTLASQIKKGILPTDFTEKKADRSYFEARNEHIPQMI
ERIVEAALRSGIPAQDVQVLAPMYRGQAGIDHINQLMQNLINPVETEQIIFEATDCQYRQ
GDKVIHLVNDAESNVFNGDLGYITDLLPAKYTDSKQDELTINFDSNEVIYPRSEWYKIRL
AYAMSIHKSQGSEFPVVILPITSSSHRMLQRNLIYTAITRAKSKLILLGEKSAFDFAVKN
TGTARNTYLIQRFSDLLTDEKVIHTSVNNLETTVENYVLTEENFLKINPMIGITDEDIQN
VFGE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaattttacttttcaggcactattgaacgcattatttttgaaaatcccagcagtttc
tttcggattctgctgttagatattgacgacaccgatgcagattttgatgattttgagatt
attgtcacgggcaccatggcggatattatggagggcgaagactatactttttggggaaac
ctcgtgcaacaccctaaatatggggaacagctcaaaataacacgctatgagcgggcaaag
ccaaccagcaaaggcttagtcaaatatttttcaagcgatcattttaaagggattggtgta
aaaacagcgcaaaaaatcgtggatctctatggcgataacacgattgacaaagttttagca
gagccagaaaaattaaaggatattgcaggtctttctgccaaaaatcgcgaagcctttctc
acgaaactaagacaaaattacggtaccgagagaatccttgccaagctatctgaatacggt
atccccaacaaactagcttttcaagtgcaagatttctacaaggaagaaaccttagaaatc
gtggaacactatccttaccaattggtagaagacattcaaggaattggttttaaaattgcc
gaccaactggcacaaagcttaggaattgaaggtaccgctccagagcgtttttgtgctggg
ttgcttcacacgctcctcactcaatctatggaaaaaggcgacacctatcttgaagcaaaa
gaacttctggaacatacgattgaactcctcgaaagttcccgtcagattgagttagaccca
agttctgttgcggatgagctggcacatttgattgaagaagataaagttcaaaatattgat
acaaagatttttgaaaacagtctcttttttgccgaagaagggattcgtagcaatctcttg
cacattttagaaaaagggaagcaaaacaagtttgaaccgaaaaagatcgaagctgctatt
gctcaaatcgaaaatgagtttgccatttcctatgatgtgactcaaaaacaagcaatttgt
gacgctatcaatcacaaaatttttatcctaacgggtggccccggaacaggaaaaacgacc
gtcatcaatggaatcattgctgtttatgctctgctgcatgggttggatttgcgcaaatct
caggatttgcctatcctgctagcagctcctactgggcgtgctgccagacgcatgaatgaa
ttaacagggcttccaagcgctacaattcatcggcatttaggcatgacaggagatgacgac
accagccatttagacgattatttggacgcagactttattattgtggacgaattttcaatg
gtagatacttggttagccaatcaactcctcagcaacatttcatcaaacaccaaactccta
atcgtcggagatgccgaccagctgccttctgtcagccccggacaagtgctggcagatttg
ctgaaaatccctcttcttccgcagaccaaattagaaaaaatttatcgacaaagcaaagac
tccactatcgtcaccttagccagtcagattaaaaaaggcatcctcccaactgatttcact
gagaaaaaagccgaccgctcttattttgaagcgcgcaacgagcatattccacagatgatc
gagcgcatcgtggaggcagctctccgcagtggcattccagctcaagatgtgcaggtgctt
gcgcctatgtaccgcggacaggctgggattgaccacatcaatcaactcatgcaaaatcta
atcaatcctgtcgaaacagaacaaatcatttttgaagcaactgattgtcaatatcgacaa
ggcgacaaggtgattcatctggtcaatgatgcggaaagcaatgtctttaacggcgatttg
ggttatatcactgatttgctgccagcaaaatatacggactctaaacaggacgagttgact
atcaactttgatagcaatgaagtcatttacccacgcagcgaatggtataaaattcgtctg
gcatacgctatgagtatccacaaatctcagggtagtgaatttcctgtagtcattttaccg
attacatccagcagccaccgtatgctgcaacgcaatcttatctatactgctatcacccgt
gccaagagcaaattgattcttcttggggaaaagtctgcctttgactttgctgtcaaaaac
actggcacagctcgcaatacctatctaatccaacgcttttcagacctcctaactgatgaa
aaagttatacacacttctgtgaataatttggaaacaactgtggaaaactatgtcttgact
gaggaaaatttcttgaaaatcaaccctatgattggaataacggatgaggatattcaaaat
gtttttggagaatga
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