Salvia miltiorrhiza (redroot sage): 130985159
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Entry
130985159 CDS
T09291
Name
(RefSeq) WD repeat-containing protein LWD1-like isoform X1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130985159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130985159
03036 Chromosome and associated proteins [BR:
smil03036
]
130985159
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130985159
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
130985159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
130985159
NCBI-ProteinID:
XP_057763948
LinkDB
All DBs
Position
5:3320078..3323383
Genome browser
AA seq
348 aa
AA seq
DB search
MGASSDPNQDGSDEQQRRSEIYTYEAPWHIYAMNWSVRKDKKYRLAIASLLEQYPNRVEI
VQLDDSTGEIRSDPAISFDHPYPPTKLIFVPDKECQRPDLLASSSDFLRLWQISDSDGGR
RVELKSLLNNNRNSEFSGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKEMVDTQLIAHD
KEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYM
ATIIMDSSKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS
SMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSNKLQILRL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagcagcgatccgaatcaggacgggtcggacgagcagcagcggcggtcggag
atctacacctacgaagctccatggcacatctatgccatgaactggagcgtgcgcaaggac
aagaaataccgcctcgccatcgccagcctcctcgagcagtaccctaaccgcgttgaaatc
gtccagctcgacgactccaccggagagatccgctccgacccggccatctccttcgaccac
ccctacccgccgaccaagctcatcttcgtccccgacaaggagtgccagcgccccgatttg
ctcgcctcctcctccgatttcctccgcctctggcaaatctccgattccgacggcggccgc
cgcgtcgagctcaagagcctgctcaacaacaaccgcaacagcgagttctccggcccgctg
acttcgtttgactggaacgaggccgagccgcggcggattgggacctccagcatcgacacc
acctgcactatttgggatatcgagaaggagatggtggatacgcagctaattgcgcacgat
aaggaggtctacgacatcgcgtggggcggcgttggggttttcgcgtcggtttcggccgac
ggctcggttagggttttcgatctgcgcgacaaggagcattcgaccataatctacgagagc
tcggagccggacacgccgctggtgcggctcggctggaataagcaggatccgagatacatg
gcgaccatcataatggacagtagcaaggtcgtggtgttggatatacgcttcccgacgctg
ccggtggtggagctgcagcggcatcaggccagtgtgaatgcaattgcgtgggcgccgcat
agttcctgccacatttgcacggcgggggatgattctcaggctttgatttgggacctctcg
tcgatggggcagccggtggagggcgggttggacccgattctggcatacactgccggggcg
gagattgagcagctgcagtggtcgtcttcgcagcctgactgggtggcgattgcattttcg
aacaagctacagattctgaggctataa
DBGET
integrated database retrieval system
