Salvia miltiorrhiza (redroot sage): 130985532
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Entry
130985532 CDS
T09291
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smil04812
]
130985532
Cytoskeleton proteins [BR:
smil04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
130985532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_DCAF4
eIF2A
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_VPS8
VPS8_N
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
130985532
NCBI-ProteinID:
XP_057764530
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Position
5:complement(6408083..6416333)
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AA seq
886 aa
AA seq
DB search
MAKRGYKLQEFVAHAGNVNCLSFGKKNCRVFITGGDDQKVNLWSVGKPTSLMSLCGHTSP
VESAAFDSAEVLVVAGSSSGAIKLWDLEETKMVRTLTGHRSYCTAVEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRTIEFHPLEFLLATGSADKTVKFWDLETFEMIGSARREAAGVRSIAFHPDGRT
LFCGLDDSLKVYSWEPVVCHDSVDMGWSTLGDLCIQDGKLLGGAYYENSVAVWIADVSLM
EPYGTRLAPEQHGHSELKHESEGSPLEKEESHVKSKSNLKSTELDSESKDIKTIYVDPAG
VNSVSSKTTDPVEVPKVVQPSDSSQISTIGVQKRNPRSSSPPSDSSQTSTIGVQKRNPRS
SSPPSDSSQISTIGVQKRNPRSSSPPSDSSQISTIGVQKRNPRSSSPPSDSKEISSIRIQ
KHSSPATLPPSESKEISTIGKRGPAVSLQAKVNVPSVNRSIIMPSIVPRDGPGKDSIGSR
RESIALAKASSGMNSKPPHTRRQSSSRLDMERMSVSLESLPPDNVKKPVVSRKDPSLRNR
LFADANAKDSSEEKQSNIDTVVEKPDRTSLPATTSSAQALDSSKGANSVKVVNGVAVVHG
RTRSLVERFEGKEKIDVGDNCTSDKAHGVVFEPAETPSPQVVDQKIDVRMEPTLDDNNVL
ENLMQSHDVLLSTFRSRLTKLQVVRHFWERNDVKGAINAVKRLPDLSVQADVVGVLIERM
EVITLDLFSSLLPVLLGLLESKAERHASLSLEVLLKLVAVFGTVVRTTVSAPRSVGVDLH
AEERLECCRQCFAHLQNVQNILPELVKRGGGLARYAQQLNMVLQQT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgcggatataagctgcaggaatttgtcgcacatgcggggaatgtaaattgt
ttgagctttgggaaaaagaattgccgcgtatttattacaggtggagatgatcagaaagtg
aatctttggtccgttggcaaacccacatctctaatgagcctgtgtggtcacactagtccg
gttgagtctgcagcctttgattcagcagaagttttagtggtagctggatcttcttctggg
gccataaaattgtgggatctggaagaaactaaaatggttcgcactcttaccgggcacaga
tcctattgcactgccgttgagtttcacccatttggtgagttttttgcatctggttccatg
gatactaatctaaagatatgggatatcagaaagaaagggtgcatccacacatataagggc
catactcgagggatcagtacaataagattcactcctgatggtcgctgggtagtgtctggt
ggatttgataatgttgtaaaggtgtgggacctgactgctggaaagcttttgcatgatttc
aagttccatgaaggacatattcgtaccatagaatttcatccgcttgagtttcttttagca
acaggttcagcagacaaaacagtgaaattctgggatctggagacatttgagatgattgga
tctgccaggcgtgaggctgcaggagtgagatctattgcctttcaccctgatggtagaacc
cttttttgtggacttgatgatagcttaaaggtttactcgtgggagcctgtagtttgccat
gattcagttgatatgggatggtcaacacttggtgatctatgcattcaagatgggaaactt
ttaggcggcgcttattatgaaaactccgttgcagtttggatagcagatgtttcgcttatg
gagccttatggtacaagattggctccggagcagcatggccactctgagctgaaacatgag
agtgagggaagtcctttggagaaggaagaaagccatgtaaagtcaaagtccaatcttaag
tctacagagctagatagtgagtctaaggacatcaaaactatctatgttgaccctgcaggt
gtaaattctgtcagttccaagacgactgacccagttgaagttcctaaggttgtacagcca
tctgattccagccaaatcagcactattggagttcagaagcggaatcctagatcaagttct
cctccatctgattccagccaaaccagtactattggagttcagaagcggaatcctagatca
agttcgcctccatctgattccagccaaatcagcactattggagttcagaagcggaatcct
agatcaagttcgcctccatctgattccagccaaatcagcactattggagttcagaagcgg
aatcctagatcaagttcgcctccatctgattccaaggaaatcagcagcattaggattcag
aagcacagttctccagcaactttgcctccatctgaatccaaggaaattagcactattgga
aagcgtggtcctgcagttagcttgcaagcaaaagttaatgtgccatctgttaatagatct
attatcatgccaagcatagtaccacgagatggccctggaaaagattcgattgggtctaga
agggaatccattgccttggctaaggccagcagtggcatgaattctaagccacctcacaca
cggaggcagtcaagcagtaggttagatatggaaagaatgtcagtgtcccttgaatctctg
ccccctgataatgtgaaaaaacctgttgttagtagaaaggatccaagccttcgtaatagg
ctgttcgctgatgcaaatgctaaggactcttctgaggagaaacaatcaaatatagatact
gttgtcgaaaagcctgacagaacttcattgccagccacaacatcaagtgctcaggctctt
gattccagcaaaggggcgaattccgttaaagttgtcaatggagtggcagttgtgcatgga
aggactcgcagtttggttgagaggtttgaaggaaaggaaaaaattgatgtgggtgacaat
tgcacctctgataaggctcatggcgttgtttttgagcctgcggaaactccctccccccag
gttgttgaccagaaaattgatgtgagaatggagcctactttggatgataataatgtcctc
gagaatcttatgcagagtcatgatgtgctattgagtacattccggtccaggctgacaaag
ctacaggtggtgcgacacttttgggaaaggaatgatgttaagggtgctataaatgctgtg
aagagactgcctgacctttctgtacaggcagatgtagttggtgttctcattgagaggatg
gaggttattacattggacctattttctagcttgcttcctgtgcttttaggattattggaa
agcaaagcagaaaggcatgctagtctttctttggaagtgcttctgaagctggtagcagtc
tttggcacagtagttcgtacaaccgtttcagcacctcgttcagttggcgttgatcttcat
gcagaggagagacttgaatgttgcagacagtgttttgcacatctccagaacgtacagaac
atccttccggaacttgtgaagaggggaggtggcttagcaagatatgcacaacaactgaac
atggttctccaacaaacatag
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