Salvia miltiorrhiza (redroot sage): 130985666
Help
Entry
130985666 CDS
T09291
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130985666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130985666
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130985666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
130985666
NCBI-ProteinID:
XP_057764724
LinkDB
All DBs
Position
5:7684694..7690010
Genome browser
AA seq
598 aa
AA seq
DB search
MNPSSESEMDPEPKKAEDLPSNSENSHGPVHPQSPFPDEVLEKVLSFVDSHKDRSSISLV
RKDWYNAERWTRSKLFIGNCYAVSPEIVARRFRRIKSVTLKGKPRFSDFNMLPLDWGANV
HSWLVMFAKVYPFLEELRLKRMTITDEGLELLAKSFPGFKALSLSSCDGFTENGLKAIAS
HCRHLTELNIQDSITEEVGGGWLSCFPENFASLEILNFSSLNGDVNFDDLERLVSRCKLL
RVLKVNESITLDQLQRLLVHAPRLTELGTGSFQQELTPRQYEEIETAFCNCRNLQVLSGL
WEATSLYLPLLYGACASLTFLNLSDAPLQSGEFAKLLAYCPNLRCLWVIDTVEDKGLEAV
GSSCPLLEELRVYPADPYDRHHRDGVTELGFLAVSRGCPKLHYVLYFCRRMTNAAVVTIV
QNCPDFTHFRLCIMTPGQPDYLTNDPMDEAFGAVVKTCMKIKRLSVSGLLTDRTFEYIGK
YAKDLETLSVAFAGSSDWGMQCIMEGCPKLRKLEIRDCPFGDAALLSGREKYEMMRSLWM
STCSVTMKGCRLLAREFPRLNVEVIREEGGDEDQAHKVYVYRSVAGPRRDAPPFVLTV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcctccgaaagcgaaatggatccagagccgaagaaagctgaggatttgcca
tcaaactctgaaaattcccatgggccagttcaccctcaatcaccattcccagatgaagtg
ctagagaaagtcctctcattcgtagattcacataaagacaggagctcaatctcccttgtg
cgcaaagattggtataatgctgagagatggacaagatcaaagctttttattggaaactgc
tatgcagtgtcaccagaaatagtggctagaaggttccgaagaattaagagtgttacactt
aaagggaagccaagattttcggattttaatatgttgccactggattggggtgctaatgtg
cattcttggttggttatgtttgccaaagtttacccgttcttggaggagctgagacttaag
aggatgaccatcactgatgagggtctggagctcttggcgaagtcattccctggcttcaag
gctttatctttgtccagttgtgatggattcactgaaaatgggctcaaagcaattgccagt
cattgcaggcacttgactgagctcaacatacaggacagtataacagaggaagttggtgga
ggttggttgagttgcttcccggaaaactttgcttcactggaaatactaaacttttctagt
ctcaatggtgatgtcaattttgatgacttggagagacttgtgagtcggtgcaaactatta
agagttctgaaggtcaatgagagtattaccttggatcaattgcaacggctgcttgtgcac
gctcctagattaacagagcttggcaccggttccttccagcaagaactcacgcctcgccaa
tatgaagagattgaaactgcattttgtaattgtagaaatctccaggttctttcaggtttg
tgggaagcaacttccttatatctccctcttctttatggagcttgtgccagcctgactttc
ttgaacttgagcgatgcgccccttcaaagtggtgaatttgcaaagcttcttgcttactgc
cccaatttacgatgcctttgggtaattgatacagtagaagacaaggggctcgaggctgtt
ggttcgagctgtcccttgcttgaagagctacgagtctaccctgctgatccatatgaccgg
catcatcgtgatggggtgactgaattaggtttcttggcagtgtctcgtggatgccccaaa
ctccactatgttctctacttctgcaggaggatgactaatgctgctgtcgtgaccatagtg
cagaactgccctgattttacccacttccgtctatgcattatgaccccaggccaaccagat
tacctcacaaacgaccccatggatgaggcctttggcgctgttgtcaaaacctgcatgaaa
attaagaggctttcagtttcgggccttctaactgatcgaacatttgagtatattggcaag
tatgcgaaagatcttgagacactgtctgtggcttttgctggcagcagcgattggggaatg
cagtgtatcatggaaggctgtcctaagctgaggaagctcgagattagagattgccccttt
ggagatgctgctctgctgtctggacgagagaaatatgagatgatgcgatcattatggatg
tccacgtgcagtgtgaccatgaaaggctgcagactactcgcaagggagtttccaagactc
aatgtagaagtgattagagaggagggaggtgatgaagatcaagctcacaaagtgtacgtc
tatcgttctgtagcagggccaagacgggatgccccgccatttgttctcacagtttga
DBGET
integrated database retrieval system
