Salvia miltiorrhiza (redroot sage): 130985845
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Entry
130985845 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130985845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
130985845
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
130985845
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DUF1258
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
130985845
NCBI-ProteinID:
XP_057764987
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All DBs
Position
5:complement(9757662..9762853)
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AA seq
546 aa
AA seq
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MSIDLILKPSCGACGSTTELYGSTCKHLTLCVSCGKSMAEKRSKCYECGTPITRLIREYN
VRASASASASSSNDKNYFIARFASGLPNFKKKNENKWSLQKEGLQGRQVTDTLREKFKNK
PWLLEDETGQFQFHGHLEGTQTATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEA
EEKMNNRRKTADGYQRWMMKATHSGAAAFGEVEKFDGREGAAAGGRGRKKTTGDDDEANT
SDRGDEDEDEESARKNRLGLNKKSGDDDEEGPRGGDLDFDDDDIEKGDDWEHEEIFTDDD
EAVGIDPEEREDLAPEIPAPPEIKQDDEDEDEADEEDKEGGLSKSGKELKKLLGRSNGLN
DSDSEDDDDDDDAEDDISPVLAPKKEAPKEEPVHNNSPLKATNSTAGRGTPSTSKSSKGK
RKVSSEESKTPNSAPLKKVKTENETKAVKDENVSSSKSVAHPKGAMAPTSSKSVPAPATG
PVTEDEIRAVLLPKTPVTTKDLLAKFRSRLKTKEEKDAFSAIMKRISKIQKTSGATNYVV
LRDNLA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccatagatttgatattgaagccgtcgtgcggtgcctgtggatcgacgacggagctc
tacggaagcacgtgcaagcacctgacgctctgcgtgagctgtggcaaatctatggccgag
aaacgttccaaatgctacgagtgcggcacccctatcactcgcctgattagggaatataat
gtacgtgccagtgccagtgccagtgccagttccagcaacgacaaaaattacttcattgca
agatttgcctcaggattaccaaattttaagaagaagaatgagaataaatggtcgttgcag
aaagaaggtttgcaggggcgccaagtgactgatactttgagggagaagtttaagaataaa
ccttggctgctggaagacgaaaccggtcagtttcagttccatggtcaccttgagggcaca
cagacagccacatattatcttctaatgcttcaagggaaggaatttgttgctatacctgct
ggttcctggtacaattttaacaaagtggcacaatataagcaactcactttggaggaagcc
gaggaaaagatgaataatagaaggaaaacagctgatggctaccagagatggatgatgaag
gcaacacacagtggagctgcagcctttggtgaagttgagaagtttgacggtcgggaaggt
gcagctgctggtgggagggggcgcaaaaaaactacaggggatgatgatgaagccaataca
tcagatagaggagatgaagatgaagatgaagagtcagcaagaaaaaacaggttggggctc
aacaagaaaagtggggatgatgatgaagaaggtccaagaggtggtgaccttgattttgat
gatgacgatattgagaaaggtgatgattgggagcatgaagaaattttcactgacgatgat
gaagctgttggaattgatcctgaggaacgagaagatttggctcccgagatccctgcacct
ccagaaattaagcaggatgatgaggatgaggatgaagctgatgaagaagacaaggagggg
gggttgagtaaatctggaaaagagctgaagaagctgcttggacgatctaatggactgaat
gattccgattcagaggatgacgacgacgatgatgatgcggaagatgatatatctcctgtg
ctcgccccaaagaaggaagctccaaaagaagagccagttcataacaacagtcccctcaaa
gcaacaaattctacagctggtcgtggaacaccatctacttcaaaatcgtccaaggggaaa
agaaaagtcagcagcgaggagtcaaaaacaccaaatagtgcacctttaaagaaagtgaaa
acagaaaatgaaacaaaagctgtgaaagatgagaatgtttcatcctcaaaaagcgttgca
catcctaaaggtgcaatggctcccacatcatcaaaaagtgtgccagcaccagcgactgga
ccagttactgaagatgaaatccgggctgttctactaccaaagacgccagtgaccacaaag
gatcttctggctaaattcagatccagactgaagacgaaagaggaaaaggatgctttttca
gctataatgaaaaggatatcaaagatccagaagaccagcggtgcaacaaattatgtagtc
ctaagagataatttggcgtag
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