Salvia miltiorrhiza (redroot sage): 130985846
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Entry
130985846 CDS
T09291
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130985846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
130985846
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
130985846
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Zn_Ribbon_1
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
130985846
NCBI-ProteinID:
XP_057764988
LinkDB
All DBs
Position
5:complement(9774259..9788194)
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AA seq
540 aa
AA seq
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MSIDLILKPSCGGCGSTDELYGSTCKHLTLCVNCGKSMAEKRLKCYECGTPITRLIREYN
VRASSSNDKNYFIARFASGLPSFKKKNENKWSLQKEGLQGRQVTDTLREKFKNKPWLLED
ETGQFQYHGHLEGTQTATYYLLMLQGKEFVAIPAGSWYNFTKVAQYKQLTLEEAEEKMKN
RRRTADGYERWMMKAAHNGAAAFGEVEKFDDREVAGGGGGGKGRKKATGDDDEANVSDRG
DEDEEEEVARKNRLGLNKKSGDDDEEGPRGGDLDFDDDDIEKGDDWEHEEIFTDDDEAVG
IDPEEREDLAPEIPAPPEIKQDDEDEDEADEEEGEGGLSKSGKELKKLLGRANGLDDSDA
EDDDDDDDTEDDISPVLAPKKEAPKEEPVDNSSPLKATTSATGRGTPSTSKSSKGKRKSS
GDETKTPNGAPLKKMKTENELKPVKDENASSSKNIAPPKGATPPTSSKSVPSSPTVPVTE
DEIRAVLLRNTSLTIQDLVAKFKSRLKSKEDKNAFADILKRISKIQKTNGAANFVVLRDR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagacttgatattgaagccgtcgtgcggcggttgtggatcgacggatgagcta
tacggaagcacgtgcaagcacctgacgctttgcgtgaattgtggcaaatcgatggccgag
aaacgtttaaagtgctacgagtgcggcacccccatcactcgcctgattagggaatacaat
gtgcgtgctagttccagcaacgacaaaaactacttcattgcaagatttgcctcaggatta
ccaagttttaagaagaagaatgagaataaatggtcattgcagaaagaaggtctgcagggg
cgccaagtgactgataccttgagggagaagttcaagaataaaccttggctactggaagac
gaaaccggccagtttcagtaccatggtcaccttgagggcacacagacagccacatattat
cttctaatgcttcaaggaaaagaatttgttgctattcctgctggttcctggtacaatttt
accaaagtggcacaatataagcaactcactttagaggaagctgaagaaaagatgaaaaat
agaaggagaacagctgatggatacgagagatggatgatgaaagcagcacataatggagct
gcagcctttggtgaagttgaaaagtttgacgatcgggaagttgcaggtggtggtggtggt
gggaaggggcgcaaaaaagctacaggggatgacgatgaagccaatgtttcagatagagga
gatgaagatgaagaggaagaggtagcaagaaaaaacaggttggggctcaacaagaaaagc
ggggatgatgatgaagaaggtccacgaggtggtgaccttgattttgatgatgatgatatc
gagaagggtgatgattgggagcatgaagagattttcactgacgatgatgaagctgttgga
attgatcccgaggagcgagaagatttggcccccgagatccctgcccctccagaaattaaa
caggatgatgaggatgaagatgaagctgatgaagaagagggagagggaggactgagtaaa
tctggaaaagagctgaagaagctgcttggacgagctaatgggttggatgattccgatgca
gaggatgatgacgacgacgacgatacggaagatgatatatctccagtgctagccccaaag
aaggaagctccgaaagaagagccagttgataacagcagtcccctcaaagccacaacttct
gcaactggtcgtgggacaccatctacttcaaagtcatcaaagggtaaaagaaaaagtagc
ggggatgaaacaaaaacaccaaatggtgcacctttgaagaaaatgaaaacagaaaatgaa
ttaaaacctgtgaaagatgagaatgcttcatcctcaaaaaacattgcacctcctaaaggt
gcaacgccacccacatcatcaaaaagtgtgccatcatcaccaactgtgccagttactgaa
gatgaaattagggctgttctactacggaatacatctctgaccatacaggatcttgtggcc
aaattcaaatctagactgaagtcgaaagaggacaagaatgcatttgcagatatattgaaa
aggatatcaaagattcaaaagacgaatggagcagcaaactttgtagttctgagagataga
tga
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