KEGG   Salvia miltiorrhiza (redroot sage): 130985951
Entry
130985951         CDS       T09291                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03020  RNA polymerase
smil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130985951
  09124 Replication and repair
   03420 Nucleotide excision repair
    130985951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smil03021]
    130985951
   03400 DNA repair and recombination proteins [BR:smil03400]
    130985951
Transcription machinery [BR:smil03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     130985951
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130985951
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 130985951
NCBI-ProteinID: XP_057765168
LinkDB
Position
5:10703207..10707900
AA seq 220 aa
MSEKGGKGNLSGKGGKSALKSPVQNGDSSGKQRKGKKVQFDSEDPIETNTPKSNGKADTP
AATGGKGDKTANGSKKSTGKGPTPVERRLAQELPPNSACLMDCEAAEILQSIQDQMVILS
QDPDIKLPVSFDTGLTYAKRGGNYAKPETVKKIFEPLKKHGVSDCEICLIANICPESVDE
VFAVVPALKPKMSKLRDPLRIALDELANLKEALANLKNSA
NT seq 663 nt   +upstreamnt  +downstreamnt
atgtcggagaaaggaggaaaaggaaatttatcgggaaaagggggcaagtctgctctaaaa
tcacccgttcagaatggtgacagctcagggaaacagagaaagggaaaaaaagttcagttt
gattctgaagatcctattgaaaccaatactccaaaatctaatgggaaggccgatactcca
gctgcaacaggtggaaaaggagacaaaactgcaaatggctctaaaaagtccacagggaaa
ggaccaaccccagtggagcgaagacttgctcaagagcttcctcccaattctgcatgtttg
atggactgtgaagctgcagaaatattgcaaagcatccaagatcagatggttatattgtct
caagatcctgatattaaactcccagtttcatttgatacgggactgacatatgccaagaga
ggtgggaactatgcaaagcctgagactgtgaagaagatatttgagccactgaagaagcat
ggtgtttctgactgcgagatttgcttgattgccaatatttgccctgaatcagtggatgaa
gtttttgccgttgtcccagctctgaagcctaagatgagcaagttaagggatcccctaaga
attgctttggatgaactggcaaacctcaaagaggcattggctaacctgaaaaactccgca
tag

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