Salvia miltiorrhiza (redroot sage): 130986052
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Entry
130986052 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
smil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130986052
03015 mRNA surveillance pathway
130986052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130986052
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130986052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130986052
NCBI-ProteinID:
XP_057765306
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All DBs
Position
5:12095925..12100864
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AA seq
416 aa
AA seq
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MAKPARGRPASPSGSDSRSSSRSRSRSRSISRSRSRSRSYSGSASRSTSRSRSRSRSKSL
SSSSSPSRSGSSPSPPPRKSPADGVKRGRSPPPQTKKSPPPPRKASPAPESLVLHVDQLS
RNVNENHLKEIFGNFGEVVNVRLAMDHVVNLPKGFAYVEFRXRADAEKAQLYMDGAQIDG
KVVRAKFTLPERKKVASPPKAVATTSRRDASKAEDTTADGGDGGKRPRDVSPRRKQLSPL
RRRSPGPRRGSPRREQDSPPLPRRRADSPYRRGDSPPIRRRPPLSPGRGRSPSPPRRFRS
PPRSSPRRIRGSPVRRRSPPPPRRRSPRRLRSPPRRSPIGRRRSRSPIRRPARSPSRSPS
PRRGRVPPSRRGRSYSSSPSPRRGPRRVSRSRSPRRPIRGRNNSSSSTSSSPPPKP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaccagcccgcggccgcccggcgtcgccgtcgggatcagattctcgctcttcc
tcccgctctcgttcccgttcccgttccatttcccgctcccgctcccgctcgcgttcctac
tccggctcagcctctcgctccacttccaggtcgcgctcccgctctcgctctaaatcctta
tcctcttcctcctctccttctcgtagcggcagctcccctagccctccgccacggaaaagt
cctgctgatggagttaagcgaggtcgctcacctccaccacaaactaagaaatctccccca
cctccaaggaaagcttcacctgctcctgaatctcttgtgctgcatgtggaccagcttagt
aggaatgttaatgaaaaccacttgaaagaaatattcggtaattttggtgaagtggtgaat
gtacggcttgcaatggatcatgttgttaaccttcccaaaggatttgcatatgttgagttc
aganttagggcagatgctgaaaaggctcagttatatatggatggtgctcaaattgatggt
aaagttgttcgggcgaagttcacattacctgaaagaaagaaggttgcttctcctcccaaa
gctgttgccaccacgtcaaggagagatgcctctaaagcagaggacactactgcagatggt
ggagatgggggaaaacgtccaagagatgtttctcctcgtcgaaagcaactatctccactt
cgaaggagatctcctggaccacgaagaggatctcctagacgagagcaagattctccaccc
ctacctcgtcgtagagctgattctccttaccggcgaggtgactcccctccgatcaggaga
aggcctcctttatctcctggcagaggccgttcaccttctcctccaagacgcttccggtca
ccgccaaggtcatctccaagaagaatacgcggtagtcctgttcgtcggcgttcccctcct
ccacctaggcgacgttcaccaagacgtcttcgaagtcctccaagaaggtctcctattggt
cgcagacgtagtcgctctcctattaggaggccagctcgttcgccatcacgatcaccctct
cctagaagaggtcgagtgccgccttctagacgtgggaggtcttattcttcgtcgcctagt
ccgcgcaggggacctcgtagggtatcacggagccgtagccctcgaaggcctattagaggg
aggaataacagcagcagcagcaccagcagttctcctccgcctaagccataa
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