Salvia miltiorrhiza (redroot sage): 130986234
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Entry
130986234 CDS
T09291
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130986234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
130986234
03036 Chromosome and associated proteins [BR:
smil03036
]
130986234
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130986234
Coactivators
SAGA/TFTC/STAGA complex
130986234
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130986234
STAGA complex
130986234
TFTC complex
130986234
SAGA complex
130986234
SLIK complex
130986234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
TAF4
Motif
Other DBs
NCBI-GeneID:
130986234
NCBI-ProteinID:
XP_057765557
LinkDB
All DBs
Position
5:14119806..14124876
Genome browser
AA seq
540 aa
AA seq
DB search
MSIVPKETIEVIAQSIGISNLSPDVLPALAADVEYRVREIMQEAIKCMRHSKRTTLTTDD
VDSALGLRNVEPIYGFASGDPLRFKRAAGHKDLFYIEEKDVEFKEVIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENPPPEALQMLSLPADNRKTEVKEDGVPVDIKLPIKHVLSRELQL
YFEKITELTVSRSESPLFKAALVSLATDSGIHPLVPYFTFFVADEVSRNLSNFSLLFALM
RLVWSLLRNPHIHIEPYLHQLMPSVMTCLVAKRLGNKFSDNHWDLRNFTASLVASICKRF
GHVYHNLQPRVTNTLVNAFIDPSKTLPQHYGAIQGIAALGANVVRLLILPNLDPYLRLLE
PEMQLEKQKNEMKRHEAWLVYGALMRAAGLCVYDRLKMLPSLPSPPARTVCKSNSKVVTT
SSNKRKASMDNMMHQPPLKKLATDSSMGANSVPVDIPGASGGYSTNVGAADSSRALGNNN
VVGSSSRRELVGGQGLKTSSALEQAWKEDTDAAQLLSSLYEYFGESMLTFVPSPEASLFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtaccgaaagaaacaattgaggttatagcccagagcattggcatcagcaat
ttatcacctgatgtgttgcctgctctggctgctgatgtagagtaccgcgttcgagaaatc
atgcaggaagctatcaaatgcatgcggcattcgaagagaactactttaactacggatgac
gttgatagtgcgctcggtttaagaaatgtcgagccaatatatggatttgcgtctggagat
ccgttgcgattcaaaagagctgcggggcacaaggatttgttctatatagaagaaaaggat
gtggaattcaaggaagtgattgaagctcctctacctaaggccccattggacacggcagtg
gttgctcactggttagctattgagggagtccaacccgctattccagaaaatccccctccc
gaagctcttcagatgctttcactgcctgcggataacagaaagacagaagtaaaagaggat
ggagtacctgttgacattaaattacctataaagcatgtgctgtcgcgggaacttcagctt
tactttgaaaaaattactgagttgactgtgagcagatccgagtcccctttatttaaagct
gcattagtgagcttggcaactgactcagggattcaccccttggttccttattttacattt
tttgttgctgatgaggtttcccggaatttgagtaacttttctctcctttttgctttgatg
cgtcttgtctggagccttcttcggaatcctcatatacacatcgagccatatctgcaccaa
ttgatgccctcggtgatgacatgcctggttgctaaaagattaggaaataaattctctgac
aatcactgggacttgagaaatttcacggctagtctagttgcttcaatatgcaagagattt
ggccatgtttatcacaatctccagccacgtgtgaccaatacattggtgaatgctttcata
gatccatcaaagactcttcctcaacattatggtgctattcaggggatagcagccctagga
gctaatgtggttcgattgcttattcttccgaatcttgatccttatctgcggcttctggag
ccagaaatgcaacttgagaagcaaaagaatgagatgaagaggcatgaagcctggcttgta
tatggggctctaatgcgtgcagctggtttgtgcgtctatgatcggctgaagatgctacct
tctctgccatctccacctgcacgtactgtctgtaagagcaatagcaaagtcgtgactaca
tcttcaaataagcgtaaagccagcatggataacatgatgcaccaaccacccttgaagaaa
ttggcaacagatagttccatgggtgcaaactctgtgccagtggacataccaggcgctagc
ggtggatattcaacaaatgttggagctgcagactcatcgagggctttaggaaacaacaat
gtggttggatcaagcagcagaagagagttagttggtggtcaaggattgaagacttcatct
gctcttgagcaggcgtggaaggaggatacagatgccgcacaattgctgtcctcactgtat
gaatattttggtgaaagcatgttaacatttgttccttcgcccgaagcctccttgttcttg
tga
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