Salvia miltiorrhiza (redroot sage): 130986613
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Entry
130986613 CDS
T09291
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
130986613
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
130986613
Membrane trafficking [BR:
smil04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130986613
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130986613
Exosomal proteins of bladder cancer cells
130986613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
130986613
NCBI-ProteinID:
XP_057766053
LinkDB
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Position
5:complement(20102755..20109047)
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILSAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSVFYVKDRFLRTFEYSTQKDTQLIPIRRPG
SNSLNQAPRTLSYSPTENAILVCSDVDGGSYELYIIPKDSYSRGDTAQEAKRGAGGSAVF
VARNRFAVLEKSSNQVLVKNLKNEVVKKSVLPIATDAIFYAGTGNLLCRAEDKVVIFDLQ
QRIVLGDLQASFVRYVVWSQDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGSWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYVTKIYGNTIFCLDRDGKNRPIIIDSTEYI
FKLSLLKKRYDHVMSMIKNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALESGNI
EKALESAKKIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFHYLITGNLDKLSK
MMKIAEVKNDVMGQFHDALYLGDVRERVKILENAGHLPLACITASIHGLHDVVERLSEKL
GDNVPSLPEGRKASLLIPPSPVLCAGDWPLLMVSKGIFEGSLDDTGRGAEEEYEEAADAD
WGEALDIGDVDNLQNGDINMALEEEEVHDENDEEGGWDLEDLDLPPDTDTPKAASNARSS
VFVCPTPGMPVSQIWVQKSSLAAEHAAAGNFDTALRLLGRQLGICNFAPLKSQFIDLHLG
SHSYLRACTSAPVISVAVERGWSESASPNVRGPPALIFNFSQLDEKLKVGYRATTAGKFS
EALRHFLSILHTIPLVVVETRREVDEVKELIIVVKEYILGLQMELKRRELKDDPVRQQEL
AAYFTHCKLQPPHLRLALTSAMTVCFKAKNLSTAANFARRLLESNPSNENQARQARQVLQ
AAERSMTDATQLNYDFRNPFVVCGATYVPIYRGQRDLTCPYCTTHFVPSQQGIVCTVCDL
AAVGVNASGLFCSPSQMR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaaattcgagaccaagagcaatcgagtgaaaggcttgagctttcacagcaag
cgcccatggatcctcgcaagtcttcacagcggcgtgatccagctctgggattaccgcatg
ggcaccctcatcgaccgattcgatgagcacgacgggcctgttcgcggcgttcatttccac
aaatcgcagccgcttttcgtctccggaggtgatgattacaaaattaaggtgtggaattat
aaattgcatagatgtctatttactcttcttggtcatcttgactatatccggacagtccaa
ttccatcatgagtatccttggatagtaagtgcaagtgatgatcagacaatcagaatatgg
aactggcaatcacgtacttgcatttctgtattaacggggcacaaccactatgtcatgtgt
gcttcatttcatcccaaagaagatttggtcgtttcagcctctttggatcagactgttcgt
gtttgggatattggtgccttgaggaagaaaacagtgtctcctgctgatgacattctgcga
ttgtctcaaatgaatgcggacttctttggtggggttgatgctgttgtgaagtatgtcttg
gaaggccacgatagaggggttaactgggcttcgtttcatccaactctccctctgattgtt
tctggagctgatgaccgccaagtaaaaatctggcgcatgaatgatacaaaggcttgggag
gtggacacgttgagaggacacatgaacaatgtttcctgtgttctgttccatgcaaggcag
gacattattgtatcaaattcagaagacaagagcatcagagtttgggatgctactaaaaga
actggcttgcagacattccgcagggagcatgacaggttctggatcctttctgcccacccc
gagatgaatcttcttgctgctggtcatgatagtggcatgattgtttttaagctagagaga
gaacgtcctgccttttctgttagcggtgactctgtgttttatgtcaaggataggtttcta
cgcacttttgagtattccactcaaaaagatacacagctgataccaatccgtcgtcctggt
tctaatagtttgaatcaagcgccacgcactctttcttatagtcctaccgagaatgcgatt
ttggtttgctcagatgtggatggtggttcgtatgagctctacattatacccaaagatagc
tatagcagaggcgacacagctcaagaggccaaaagaggtgctgggggttcggctgttttt
gtggctcgaaataggtttgctgtgcttgagaagagcagcaaccaagtcctggtcaagaac
cttaaaaatgaagtagtgaaaaagagtgttctgcctattgctactgatgccatattctat
gctggtactgggaatctgctctgccgggctgaggacaaggttgttatttttgatctccaa
caaagaattgttcttggagatcttcaagcttcttttgttaggtatgtggtttggtctcag
gatatggagagtgttgctttactgagcaagcattcaattgttattgctgataaaaagctt
gtgcaccgctgcactcttcatgagaccattcgtgtcaagagtggatcatgggatgataat
ggtgtttttatctatactacactgacgcacattaagtattgcctgcctaatggggatagt
ggaattataaagaccttggatgttccagtgtatgtaacaaaaatatatgggaatacaatc
ttttgcctggaccgagatgggaaaaatcgtccgatcattattgattcaacagaatatatt
ttcaagttgtccctgctgaagaagagatatgatcatgttatgagtatgataaagaattca
gaactatgtggacaagccatgattgcatatttgcaacagaagggcttcccacaagttgct
ctctattttgtaaaggatgagagaacacgcttcaacttagcccttgaaagcggtaacatt
gagaaagcccttgaatctgctaaaaagattgatgagaaggattactggtacaggctagga
gtagaggcccttcggcagggaaatgcaggaattgttgaatatgcataccagaagacaaag
aactttgagaggctttcttttcattatcttataactggcaatctggacaagttgtcgaag
atgatgaaaattgccgaggtgaaaaatgatgttatgggccaatttcatgatgcattgtat
cttggtgatgtgcgagagcgtgtgaaaattctggagaatgcgggtcacttgcccctggct
tgcataacagcttccattcatgggctccatgatgtagtggagcgtttgtctgaaaaactg
ggggataatgttccttctctgcctgaagggaggaaagcttctctgttgatccccccaagt
ccagtgctatgcgctggagattggcctctgttaatggtcagtaaaggcatatttgagggt
tctcttgacgacacaggtagaggtgcagaagaagagtatgaagaggctgcagatgctgat
tggggtgaggctttggatattggtgacgtggataatctgcagaatggagacatcaatatg
gcgctggaggaggaagaggtgcacgatgagaatgatgaggagggaggatgggatcttgag
gatctagatctgcctcctgatactgatacgccaaaggcggcttctaatgcccgttcttct
gtttttgtttgccccacacctggtatgcctgtgagccaaatttgggtccaaaagtcatct
cttgctgctgaacatgcagctgctggcaactttgatacagcattgcgtttattgggccgc
cagttaggaatatgcaattttgcccctttaaagtcgcaatttattgatcttcacttgggc
agtcacagttatttgcgtgcctgtacttcagcaccagtaatatctgttgcagtagagaga
ggctggagtgaatcagcaagccccaatgtgcgaggtccccctgctcttatcttcaatttc
tctcaactagatgagaagctgaaggttggttacagagcaacgactgctggaaagttttct
gaagctcttcgacatttcctgtcaattcttcacacaattccactggttgtggttgaaaca
agaagagaggtggatgaagtcaaggaattgattatcgtggtaaaggaatatattcttggc
ttgcaaatggagcttaagaggagggaactgaaggacgatccagttcgtcagcaggaactt
gctgcatatttcacccattgcaagctccagccaccgcacttgagacttgcactgaccagt
gcaatgactgtttgcttcaaggcgaaaaatctgagcactgcagccaactttgccaggcgg
cttctggaaagtaatccaagtaatgagaatcaagcaagacaggcccgccaggttctgcag
gctgctgaaaggagtatgacggatgccacgcaactcaactatgatttcagaaatcctttc
gttgtttgtggagcgacatatgttccaatctatagggggcagagagatttaacctgccca
tactgcactacacatttcgttccatctcagcaagggatagtctgcactgtttgtgatctt
gcggcagtaggagttaatgcttctggcttgttctgttctccttcgcagatgagatga
DBGET
integrated database retrieval system