Salvia miltiorrhiza (redroot sage): 130986873
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Entry
130986873 CDS
T09291
Name
(RefSeq) nuclear pore complex protein NUP98B-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130986873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130986873
03036 Chromosome and associated proteins [BR:
smil03036
]
130986873
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130986873
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130986873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
130986873
NCBI-ProteinID:
XP_057766383
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All DBs
Position
5:complement(32568062..32574662)
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AA seq
862 aa
AA seq
DB search
MVAQHHHGFSVSTKPWSITGTECQGRREAPYSETPEVNSGISAGMIKSISAMPHYKDRSH
EELRLEESRLLKGYSFPSQSAFQQSSPLFGPLTSLVPSSEPSFRATATLVSDASVKPTIG
TGFGYFPFGGSTGDGFVGRDLTNSAFGTSSTKMFSPTNNSRPTSSAFGVSSASSSFGITS
TPGFLSGTSNKPVSTTSVFSSGSTSASRSNSIFGIQTSPGSQSTTSTKYQGSRPGFSATV
ERENNRDVVGNMQSISAMPFHKDKSHEELRSEDYGLCNACYKGGQTLWGAPFSRSSCLKT
SDTPSNIFSFAPLSNQSSVPSPFQMFKSTLSKLERENSILPSTTISTAPTLSPSVNPFSY
TNVYHSQPQAFTPAAAPFVPSFTPTLNPPSLLPSTEPMVKSSYQFPNVSTTFTNVYAPLS
KQFPDHSLFQPLKSYFSEPATASLGATLTSNLNPPSLIPFTEPMLKNNCECTKVATTFTS
SSVGTFSFTKPSVFVSPFIQFTPTTSSDPWSPIKNASQPQQTAEKLGPLSTNDLNTPSQA
SSGLTTVTQFTSQNINGQQYIASSNSSMQSSLVVNPFATRFPINQPNADTSGLHGIRSLP
VSNNLSSNRRTSLLRIRHVSSKYPGLPTQKTNGRSSETKVPFFVDDVDKLGPVDPFLPRE
NPRAWVNISSLSLRSPCHIAGKGAERLSGDMSTLLNQHEHEVAEITEADVATLLPKLPDG
EEYYTEPSLCKLAAKEMAEAGFCKHVKDFVVGRQGYGNIKFLGETDICHLDIESTVQFKN
RQVVVYPDETKKPRVGQQLNKAAELTLLNVKCSNKNTGELYVEGHQVEKYKEILIKRTQE
QGAEFVSYDPVEGEWKFRVQHF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcaacatcatcacggcttctctgtctcaacaaaaccttggagcattactgga
acagaatgtcaaggacgtagagaagcaccgtattctgagacaccagaagtcaatagtggg
atctccgctggaatgatcaaatcgatatcagcaatgcctcattacaaagacagaagtcat
gaagagttgaggttagaggaatctagactactcaagggatatagttttcctagccagagt
gcatttcaacaatcaagccctctttttggtcctcttacatcgctagtgccgtcaagtgaa
ccctcttttcgagcaactgctactcttgtatcagatgcatctgtcaaaccaacaattggc
acaggttttggttattttccatttggtggttcaactggtgatggatttgttggtcgagat
ctaacaaattctgcttttggaacatctagcaccaagatgtttagtcccacaaacaactcg
agacctacaagctcagcattcggtgtatccagtgccagcagtagtttcggaattacatca
acacctggtttcttgtctgggacttcaaacaaacctgtgtcaaccacttccgtgtttagc
tctggttcaacttctgcttctagaagcaatagcatatttggaattcagacttctcccgga
tcccagagcacaacttcaactaagtatcaaggaagtagaccaggattttctgcaacagtt
gaaagagaaaataatagagatgttgttgggaatatgcagtccatatctgcaatgccattt
cacaaagataaaagtcatgaagagttgaggtcagaggattatggactatgtaatgcatgt
tataaaggaggacaaacactttggggtgctccattttctagatcatcttgcttaaagaca
tctgatactccatcaaatatcttcagttttgcaccattatccaaccagtcttcggtccct
tctccctttcaaatgttcaaatccactttatccaaacttgagagagaaaacagtatactt
ccgagcaccacaatctccacagctccaacactttctccatctgtgaatccctttagttac
actaatgtgtatcactcacaaccacaagcctttacccctgctgcagctccttttgtgcct
tcatttaccccaactctgaatccaccttcgttactcccttctacggagccaatggttaaa
agtagttatcaattccccaatgtgtcaacaacattcactaatgtatatgcaccattgtcc
aagcagttccctgaccattctctgtttcaaccgttaaaatcctatttctctgaacctgct
acagcttctttgggggctacattgacctcaaacctgaatccaccttccttaatccctttt
actgagccaatgcttaagaataattgtgaatgcaccaaagtagcaacgacattcactagt
tcatctgttggaacattttccttcacaaaaccttctgttttcgtctcaccattcatacag
tttaccccaacaacatcatcagatccttggtctcctatcaagaatgcatcacagcctcaa
caaactgctgaaaaactgggacccctttcaactaatgacctgaatacaccatctcaagct
tcaagtggcctgacaacagtgacacaatttaccagtcaaaacatcaatggacaacagtac
attgcatcaagcaattcaagcatgcagtcatcacttgtggtgaatccttttgcaacaaga
tttccaattaatcaacccaatgcagatacgtcaggacttcatggaatacgtagcttacca
gtctcaaacaatctttcatcaaatagaagaacatccttattgagaatccggcatgtgtcc
tccaaataccctggattgcctactcagaagactaatggtaggagcagtgagactaaggtt
ccatttttcgttgatgatgttgataaacttggtccagtggaccctttcctgccacgggag
aaccccagggcttgggtcaatatctcctcgttatctctccgttcaccttgccacattgca
ggcaaaggtgctgaaaggttgagtggagatatgtctaccctattgaaccaacatgaacat
gaagtcgccgaaataactgaggctgatgttgcaacactactgcctaagcttcctgatggg
gaggaatattacactgaaccttcactgtgcaagctggcagcaaaggaaatggcagaagca
ggattctgcaagcatgtgaaggactttgttgtgggaaggcaaggttatggaaacatcaag
tttcttggggaaacagatatctgccatcttgatatcgagtccaccgtgcaattcaagaat
cgccaagtagttgtttatccggacgagacaaagaagccgcgagtcgggcaacagcttaac
aaggcagctgagctcactctactcaatgttaaatgcagcaacaaaaacacgggggagctg
tatgttgaaggccatcaagttgagaagtacaaagagattttgatcaaaaggactcaagag
caaggagctgagtttgtttcctatgatccagttgaaggggaatggaaatttagggttcaa
cacttttag
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