Salvia miltiorrhiza (redroot sage): 130987179
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Entry
130987179 CDS
T09291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smil01002
]
130987179
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130987179
Enzymes [BR:
smil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130987179
Peptidases and inhibitors [BR:
smil01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130987179
Ubiquitin system [BR:
smil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130987179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
130987179
NCBI-ProteinID:
XP_057766809
LinkDB
All DBs
Position
5:complement(50628230..50633251)
Genome browser
AA seq
503 aa
AA seq
DB search
MHAAVDFDWLLQFTVSAAAETAAAMVARFLNFVRSTSSLVLAVASNIGSSPDRSNEGMME
AAVGGAAKVVDCCAFCGITMGRRFAGDEMVEYCSASCQSSHWNVERETKCTRTKSPYALT
GRKVSLLSSVESSEINEQSNEILFPYEEFIEFFNWEKPGYPPCGLINGGNSCFANVVLQC
LTYTRPLAAYILEKGHKLECRMDKWCFLCDFQTHVERASWSHTAFIPINILSRLNFIGGN
LECGQQEDAHEFLRFAIDKMQSIFLDEFGGEKTSHPRYQETSFVQHIFGGCLQSQVICSK
CNNVSNRFDHMMDLTVEIHGDAESLVQCLDQFTAEEWLHGDNMYKCDCCSAYVMAQKRLA
ILQAPNILTIALKRFQSGGFNKLNKRVTFPEKLDLRSYMSELEDGNDLYKLYAVIVHVDI
HHNFGHYICYVKDFGGSWYRIDDDKVSTVGLDEVLSQGAYMLLYSRICARPSCLLPAASL
RERENKKLKMQTVDSVNDTACRF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcggctgtagacttcgattggttgctgcaattcacggtgtctgctgcggcggag
acagcggcggcgatggtggcaaggtttctcaatttcgttcggagcacttcgtctttagtt
ttggcagttgcctccaatatcggttcttcgccggatcgcagtaacgaagggatgatggag
gcggcagtcggcggagccgccaaggttgttgactgctgcgctttttgcggcattaccatg
gggagacgcttcgccggcgacgagatggttgagtactgctctgcaagctgtcaaagttct
cactggaacgttgagcgcgagacaaagtgcactcgtacaaaatcaccatatgcattgacg
ggaaggaaagtttcactactttcttctgttgaaagttcagagattaacgagcagtcaaat
gagattttgttcccatacgaagaattcatagaatttttcaattgggagaagccaggctat
cctccttgtggacttataaatggtggaaacagctgcttcgctaatgtggttcttcagtgt
cttacatacacccgtccacttgctgcctacatcttggagaaaggccacaagctagaatgt
cggatggataaatggtgcttcctgtgtgattttcaaactcatgtggaaagggctagctgg
agtcatactgcattcattcctattaacattctttcacgattgaattttattggtggtaat
cttgagtgtgggcagcaggaggatgcccatgagttcttgaggtttgcaattgataaaatg
caatctattttcctcgatgaatttggtggagaaaagacttctcatcctaggtatcaagag
acgagctttgtccaacatatattcggaggttgccttcagtctcaggttatatgcagcaaa
tgcaataatgtatcaaaccgatttgatcacatgatggatttaactgttgaaatccatggg
gatgctgagtctttggtgcagtgtttggatcaattcactgccgaagagtggctacacgga
gataatatgtataaatgtgattgttgcagtgcttatgtcatggcacagaagcgccttgct
attctacaggcacccaacattcttacaattgccttaaaaagatttcagagtggaggattt
aataaacttaacaagagggttactttcccagagaagctggatcttcgctcttatatgagt
gaattggaagatgggaatgatctttacaagctatatgccgtaattgttcatgtggacata
caccataattttggccactacatctgctatgttaaggattttggtggaagttggtacagg
attgatgatgataaggtttcaaccgtgggcttggatgaggtcctttcacagggagcatat
atgctcttatacagcaggatttgtgctcgcccatcctgcttgcttcctgctgcatcgctg
agagaacgagaaaacaaaaaactaaaaatgcaaacagtagactcagtcaacgacacagcc
tgtcgattctga
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